Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0816 |
Symbol | |
ID | 4021290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 921365 |
End bp | 922306 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637961006 |
Product | protoheme IX farnesyltransferase |
Protein accession | YP_567955 |
Protein GI | 91975296 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.566736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCGGTCA TCGACACCAA CCAGATCGAT CTCGCCGCGC CCCGCATCTC CGAGGCCGGA GTCGCCGACT ACGTTGCGCT GTTGAAGCCG CGGGTGATGT CGCTGGTGGT GTTCACTGCG CTGGTCGGTA TGCTGCTGGC CCCGGGCGAT TTCCATCCGG TGCTGGCAGT CACCGCGATG CTGTGCATCG CCGTCGGCGG CGGCGCCGCC GGCGCGCTGA ACATGTGGTA CGAAAACGAT ATCGACGCGC TGATGACGCG CACCGCGAAC CGGCCGATCC CGCGCGGCCG CGTTACCCGG CCCGAAGCGC TGACCTTCGG CATGACGCTG TCGTTCTTCT CGGTGGTCAC GCTCGGCGTA CTGGTCAACT GGATCGCCGC GGCGCTGCTC GCCTTCACCA TCTTCTTCTA CGTCGTGATC TATACGATGT GGCTGAAGCG ATCGACCGCG CAGAACATCG TGATCGGCGG CGCCGCCGGC GCGCTGCCGC CGGTGGTGGC CTGGGCCGCG GTCACCGGCT CGCTCGCGGT CGAGCCGCTG CTGTTGTTCG CGATCATCTT TTTCTGGACG CCGCCGCACT TCTGGGCGCT GGCGCTGTTC CGTAACGACG ACTACGCCCG CGCCGGCGTG CCGATGCTGC CGGTGGTCGC AGGTCCCGAT CATACAAGGC TGCAGATCCT GCTCTACACC ATCGTGCTGG TCGCGGTCGC CGCAGCGCCG TGGCCGCTCG GCTATTTCGA CGCGGTGTAC GGCATTGCCT CGCTGGCGCT CGGCGGCTGG ATGCTGGTGC TCGCCATTCG GGTGTATCGC CATCGCAGCG GCAGCGCCGC GCTGCGGGCG ACGCGCAATC TGTTCAAGTT CTCGATCCTG TATCTGTTCG CGCTGTTCTC GATCCTGTTG ATCGAGGTCG TCGCGAAGGC CGTGTGGCAG TTGTTCGCCT GA
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Protein sequence | MSVIDTNQID LAAPRISEAG VADYVALLKP RVMSLVVFTA LVGMLLAPGD FHPVLAVTAM LCIAVGGGAA GALNMWYEND IDALMTRTAN RPIPRGRVTR PEALTFGMTL SFFSVVTLGV LVNWIAAALL AFTIFFYVVI YTMWLKRSTA QNIVIGGAAG ALPPVVAWAA VTGSLAVEPL LLFAIIFFWT PPHFWALALF RNDDYARAGV PMLPVVAGPD HTRLQILLYT IVLVAVAAAP WPLGYFDAVY GIASLALGGW MLVLAIRVYR HRSGSAALRA TRNLFKFSIL YLFALFSILL IEVVAKAVWQ LFA
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