| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0807 |
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| Symbol | |
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| ID | 4021281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 910168 |
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| End bp | 912384 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637960997 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_567946 |
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| Protein GI | 91975287 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.35193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTACA GCAACTTCAA GATCGAGACC GACTCCGACG GCATCGCGCT CGTGACCTGG
GATCTTCCCG GGCGCTCGAT GAACGTGCTC GATACCAAGA CCATCGAGGA ACTCGGTGCG
ATCGTCGAGC AGACCACCAA GGACGCCGCC GTCAAGGGCG TGGTGATCAC GTCCGCCAAG
GAGGCGTTCT GCGCCGGCGC CGACCTGTCG ATGCTGGAAG GCATGAACAA GACCTTCGCG
CAGATCCGAA AGGAGAAGGG CGAGGAAGCC GCGCAGCAGA TGCTGTTCGA CGAGAGCCGC
AAGCTGTCGC AGATCCTGCG CGGGATTGAA ACCTCCGGGA AGCCGTGGGT CGCGGCGATC
AACGGCCTCG CGCTCGGCGG CGGCTTCGAG GTGACGCTGG CCTGCCATTA TCGCGTGGCC
GCCGACAATC CGAAGACCCG GCTCGGCCTG CCCGAGATCA AGGTCGGCCT GTTCCCGGGC
GGCGGCGGCA CCCAGCGGAT TCCGCGCATT GTGCAGCCGC AGGATTCGCT GACGATCCTG
CTCAAGGGCG ATCAGATCAA GCTCGACAAG GCCAAGGCAT GGAAGCTGGT CGACGCCGTG
GTGCCGGCTG CGGACCTGAT CAAGGCCGCG AAGGACTGGA TCAAGGGCGG CGGCAAGGCG
GTCGCGCCGT GGGACGAGAA GGGCTTCAAG CTGCCGGGCG GCCCGGTGTT CTCGAAGCAG
GGCATGATGA TGTTCCCGGC CGGCAACGCC ATCTATCGCC GCGAGACCTA CGATAACTAT
CCGGCAGCGC GTGCCATCAT GAGCTGCGTC TATGAAGGCC TGCAGGTGCC GATGGACGTC
GCGCTGCGCA TCGAGTCGCG CTATTTCGCG CAGGTGGTAC AGACCAAGGA AGCGGCGGCG
ATGATCCGCA GCCTGTTCCT GTCGATGCAG GAGCTGAACA AGGGCGCGCG CCGTCCGCAG
GGCGTGCCGC CGACCAAGGT CAAGAAGCTC GCCATCATCG GCGCAGGCTT CATGGGCGCC
AGCGTCGGTT ACGTCTCGGC CAAGGCCGGC ATCGACGTCG TGCTGATCGA TCGCGACCAG
GAGAGCGCCG ACAAGGGCAA GGCGCACTGC AAATCGGTGA TCGACGGGCT GATCGCCAAG
GGTCGCGCCA AGGAAGCCGA CCGCGACGCG CTGCTGGCGC GCATCACCGC GACGCCGGAC
TTCAACGCGA TCAAGGATTG CGACCTGGTG ATCGAGGCGG TGTTCGAGGA TCGCAAGGTC
AAGGCCGACA CCTACGCCAA GGCGCAGCCG CTGCTGAAGG AAGGCGCGAT CTTCGCCTCC
AACACCTCGA CGCTGCCGAT CAACTCGCTG GCCGAGGAGT TCAAGGACCA GTCGAAGTTC
ATCGGCATCC ACTTCTTCTC GCCGGTCGAG AAGATGATGT TGGTGGAAGT GATCATGGGC
AACAACACCG GTGACGTGGC GCTGGCGACC GCGCTCGACT ACACCCGCCA GATCGGCAAG
ACCCCGATCG TGGTGAACGA CAGCCGCGGC TTCTTCGCCA ACCGCTGCGT GCTGCGCTTC
ACCGCCGAGG GCCTGGAGAT GCTGCTCGAA GGCGTGCCGC CGGCGATGAT CGAAACCGCC
GCCAAGATGG CCGGCATGCC GGTAGGCCCG CTGTCGCTCG CCGACGAAGT CGCGCTCGAT
CTGATCGTGA AGATCATGAA GGCCACCGAA GTCGACCTCG GCGAACAGGC GGTCGATCAG
GCGCAGAAGA AGCTGATGAT CGAGATGGTG GAGAAGCAGG GCCGCTTCGG CCGCAAGAAC
GCCAAGGGCT TCTACGACTA TCCGGAGAAG GGCAAGGGCC AGAAGGCGCT GTGGAGCGGC
ATCGGCGCGC TGCAGCCGAA GCAGCTCGAT CCCGACACCA TCGACGTCGA GGAGCTGAAG
CAGCGCTTCC TGGTGGTGCA GGCGGTGGAA GCCGCGCGCA CGGTCGAGGA CAACGTCATC
GTCGATCCGC GCGAAGCGGA TGTCGGCTCG ATCCTCGGCT TCGGCTTCGC GCCGTTCACC
GGCGGCACGC TGAGCTACAT CGACTTCATG GGCACCAAGG AGTTCGTGGC GCTGTGCCAT
AAGCTCGAAG GCAAATTCGG CTCGCGCTTC ACGCCGCCGA AGCTCTTGGA AGACATGGCC
AAGACCGGCG ACACCTTCTA CCACCGCTTC GCCCCGAAGA AGCAGGCGGC GGCGTAG
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| Protein sequence | MSYSNFKIET DSDGIALVTW DLPGRSMNVL DTKTIEELGA IVEQTTKDAA VKGVVITSAK
EAFCAGADLS MLEGMNKTFA QIRKEKGEEA AQQMLFDESR KLSQILRGIE TSGKPWVAAI
NGLALGGGFE VTLACHYRVA ADNPKTRLGL PEIKVGLFPG GGGTQRIPRI VQPQDSLTIL
LKGDQIKLDK AKAWKLVDAV VPAADLIKAA KDWIKGGGKA VAPWDEKGFK LPGGPVFSKQ
GMMMFPAGNA IYRRETYDNY PAARAIMSCV YEGLQVPMDV ALRIESRYFA QVVQTKEAAA
MIRSLFLSMQ ELNKGARRPQ GVPPTKVKKL AIIGAGFMGA SVGYVSAKAG IDVVLIDRDQ
ESADKGKAHC KSVIDGLIAK GRAKEADRDA LLARITATPD FNAIKDCDLV IEAVFEDRKV
KADTYAKAQP LLKEGAIFAS NTSTLPINSL AEEFKDQSKF IGIHFFSPVE KMMLVEVIMG
NNTGDVALAT ALDYTRQIGK TPIVVNDSRG FFANRCVLRF TAEGLEMLLE GVPPAMIETA
AKMAGMPVGP LSLADEVALD LIVKIMKATE VDLGEQAVDQ AQKKLMIEMV EKQGRFGRKN
AKGFYDYPEK GKGQKALWSG IGALQPKQLD PDTIDVEELK QRFLVVQAVE AARTVEDNVI
VDPREADVGS ILGFGFAPFT GGTLSYIDFM GTKEFVALCH KLEGKFGSRF TPPKLLEDMA
KTGDTFYHRF APKKQAAA
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