Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0806 |
Symbol | |
ID | 4021280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 909296 |
End bp | 910069 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637960996 |
Product | signal protein |
Protein accession | YP_567945 |
Protein GI | 91975286 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCTG TCTGCACCCA GTGCCGCAAC GATCTGCCGT TGCCTTTCGC CATGAAGATG GCGTTCCAGC CGATCGTCGA TCTGTCGGCG CAGCGGGTGT GGGGCTACGA GGCGTTGGTG CGAGGTCCGA ACGGCGAACC CGCGGGAACC GTGCTGTCGC AGGTGTCCGA AGAAATCCGC TACCGGTTCG ACCAGGCCGC GCGGGTGCTG GCGATCGAAA CCGCGGGCAC TTTGTTCCGC GATCCGAACG TGCGGCTGTC GATCAACTTC ATGCCCAACG CGGTATACGA GCCCAACGCC TGCATCCAGA AATCGCTGGC TGCCGCGAAA CGCGCCGGCT TCCCGCACCG GAACCTGATG TTCGAGTTCA CCGAGAACGA GCGCATGCAG GACGCCGCCC ACCTGAACAA GATCATCGAG GCCTACCGCA AGCTCGGCTT TCTCACCGCG CTCGACGATT TCGGCGCCGG CTTCGCGGGC CTCGGCCTGC TCGCCAAGCT GCAGCCCGAT CTGATCAAGA TCGACATGGA AGTGCTTCGC GACATTCACC TCAGCAGGGC CAAACAGGTC ATCGTCGCGG GAATCGTCGG CATCGCCCGC GAACTCGACG TCCGCGTGCT GGCCGAGGGC GTCGAGTGCG AACAGGAATG CACCGTGCTG CGCGCGGCCG GGATTTCGCT GTTCCAGGGT TACCATTTCG CTAAGCCCGC TCTGATGGCT CTGCCCGAGG TGCCGCTGCT GACGCCGAGG ATTGACGTCA AAGCTGCCGG TTAG
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Protein sequence | MSSVCTQCRN DLPLPFAMKM AFQPIVDLSA QRVWGYEALV RGPNGEPAGT VLSQVSEEIR YRFDQAARVL AIETAGTLFR DPNVRLSINF MPNAVYEPNA CIQKSLAAAK RAGFPHRNLM FEFTENERMQ DAAHLNKIIE AYRKLGFLTA LDDFGAGFAG LGLLAKLQPD LIKIDMEVLR DIHLSRAKQV IVAGIVGIAR ELDVRVLAEG VECEQECTVL RAAGISLFQG YHFAKPALMA LPEVPLLTPR IDVKAAG
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