Gene RPD_0806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0806 
Symbol 
ID4021280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp909296 
End bp910069 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content64% 
IMG OID637960996 
Productsignal protein 
Protein accessionYP_567945 
Protein GI91975286 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCTG TCTGCACCCA GTGCCGCAAC GATCTGCCGT TGCCTTTCGC CATGAAGATG 
GCGTTCCAGC CGATCGTCGA TCTGTCGGCG CAGCGGGTGT GGGGCTACGA GGCGTTGGTG
CGAGGTCCGA ACGGCGAACC CGCGGGAACC GTGCTGTCGC AGGTGTCCGA AGAAATCCGC
TACCGGTTCG ACCAGGCCGC GCGGGTGCTG GCGATCGAAA CCGCGGGCAC TTTGTTCCGC
GATCCGAACG TGCGGCTGTC GATCAACTTC ATGCCCAACG CGGTATACGA GCCCAACGCC
TGCATCCAGA AATCGCTGGC TGCCGCGAAA CGCGCCGGCT TCCCGCACCG GAACCTGATG
TTCGAGTTCA CCGAGAACGA GCGCATGCAG GACGCCGCCC ACCTGAACAA GATCATCGAG
GCCTACCGCA AGCTCGGCTT TCTCACCGCG CTCGACGATT TCGGCGCCGG CTTCGCGGGC
CTCGGCCTGC TCGCCAAGCT GCAGCCCGAT CTGATCAAGA TCGACATGGA AGTGCTTCGC
GACATTCACC TCAGCAGGGC CAAACAGGTC ATCGTCGCGG GAATCGTCGG CATCGCCCGC
GAACTCGACG TCCGCGTGCT GGCCGAGGGC GTCGAGTGCG AACAGGAATG CACCGTGCTG
CGCGCGGCCG GGATTTCGCT GTTCCAGGGT TACCATTTCG CTAAGCCCGC TCTGATGGCT
CTGCCCGAGG TGCCGCTGCT GACGCCGAGG ATTGACGTCA AAGCTGCCGG TTAG
 
Protein sequence
MSSVCTQCRN DLPLPFAMKM AFQPIVDLSA QRVWGYEALV RGPNGEPAGT VLSQVSEEIR 
YRFDQAARVL AIETAGTLFR DPNVRLSINF MPNAVYEPNA CIQKSLAAAK RAGFPHRNLM
FEFTENERMQ DAAHLNKIIE AYRKLGFLTA LDDFGAGFAG LGLLAKLQPD LIKIDMEVLR
DIHLSRAKQV IVAGIVGIAR ELDVRVLAEG VECEQECTVL RAAGISLFQG YHFAKPALMA
LPEVPLLTPR IDVKAAG