Gene RPD_0802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0802 
Symbol 
ID4021276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand- 
Start bp904684 
End bp905232 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content61% 
IMG OID637960992 
Productregulatory protein, TetR 
Protein accessionYP_567941 
Protein GI91975282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.334843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.796776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCGG ATACCAAAGA TCGGCTCACA CGTTCGGACT GGCTCGCCCA CGGGCTGCGA 
ACCTTGGCGC GGCACGGCGC GAATGCCCTC AAAGTCGGCG ACCTTGCCAA CGGGTTGAAC 
GTCTCTCGCG GAAGTTTCTA CTGGCACTTC AGAGACTCGA CCGATTTCCG TCTCCACCTC 
CTGCAGCTCT GGCAGGAGCG TGCGACCGAT CAGGTCTTCC GCGAGATCGA TGCCGCAATC 
GTCGGTCCGG CGCGGCTGAC GCACCTGATG AAGCTCGCGT TCAACGAGGA CAGAAATCTC 
GACAGGGCGA TCCGGGAGCT TGCCGCGACC GATTCGGCGG CCGCCGAGAT GGTGGCCTTG 
GTCGACGCCC GGCGCGTCGA GTATCTCGCG AAGCTACTGA TCGAGTCCGG AGTTGAAAGT 
CGGCGAGCGC TGCCACGGGC GGAGTTTTTA TACTGGGCCT ATATCGGCCA AACGGCGGTT 
CTGAATCCGG TGCACACCGT TATCACCGAA CTGGATATCG ACGACCTGAG CGCTTTGTTC 
ACGCGATAA
 
Protein sequence
MDPDTKDRLT RSDWLAHGLR TLARHGANAL KVGDLANGLN VSRGSFYWHF RDSTDFRLHL 
LQLWQERATD QVFREIDAAI VGPARLTHLM KLAFNEDRNL DRAIRELAAT DSAAAEMVAL 
VDARRVEYLA KLLIESGVES RRALPRAEFL YWAYIGQTAV LNPVHTVITE LDIDDLSALF 
TR