Gene RPD_0790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0790 
Symbol 
ID4021264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp886884 
End bp887588 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content64% 
IMG OID637960980 
Productcarbonic anhydrase 
Protein accessionYP_567929 
Protein GI91975270 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.518522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGATG ACTGCTCCAA AGGCGAGCTA TCTCGTCGAA CGCTGGTTCA AGCTGGTTTC 
GGCTTGTTCG CCGCCGCCGC GCTTCCATCG GCTGTCCATG CGCAGGCGGC AAGCCCGGGC
GACACGCCGG ACGCAGCGCT CGACAAGCTG ATGCAGGGCA ATGCGCGCTA TGTCGGCAAT
CAACTGCGCG AGCGTGATTT CTCCGCCGGA CGGGTCGCAC GTTCGCAGGG ACAGTCGCCG
TTCGCGGCGA TCCTCGGCTG CGCCGACTCA CGGATTGCGC CCGAACTAGC GTTCGACCAG
GGTCCGGGCA ATTTGTTCGT CGTACGCGTC GCCGGCAATT TCGTCACGCA AGACGGGCTT
GCCAGCCTCG AATACGGCGC CGCGGTGCTC GGCACCAAGG TGATCATGGT GCTCGGTCAC
AGCAATTGCG GCGCGGTCAA TGCCACCATC GGCGCGCTGC AGAAGGGCAA CGACCTACCC
GGACACATCG GCGATCTGGT GCGTGCGATG AAGCCGGGGA TCGAGCCGGC GCTCAAGCAG
GCCGGCGACA ACCTGCCGCA GCGGGCGGTG ATCGCGAATG TGCGCAGCAA TGTGCAGCAG
TTGCTGGAAT CGAAGCCGAT CCTCTCTGGA CTGGTGTCCA GCGGCAAGCT GAAGGTGGTC
GGCGGCGTCT ACGATCTCGC GAGTGGCAAG ATCGATCTGG TGTAG
 
Protein sequence
MCDDCSKGEL SRRTLVQAGF GLFAAAALPS AVHAQAASPG DTPDAALDKL MQGNARYVGN 
QLRERDFSAG RVARSQGQSP FAAILGCADS RIAPELAFDQ GPGNLFVVRV AGNFVTQDGL
ASLEYGAAVL GTKVIMVLGH SNCGAVNATI GALQKGNDLP GHIGDLVRAM KPGIEPALKQ
AGDNLPQRAV IANVRSNVQQ LLESKPILSG LVSSGKLKVV GGVYDLASGK IDLV