Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0776 |
Symbol | |
ID | 4021250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 871259 |
End bp | 872296 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637960966 |
Product | inner-membrane translocator |
Protein accession | YP_567915 |
Protein GI | 91975256 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.300879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACACCA CGATATTCCT GTTTCTATTG CAGGACGGCA TCATCAACGG TGCGGTCTAT GCGTTGGTTG CCATTGCGTT GGTGCTGGTG TTCGCGGTCA CGCGCGTCAT CCTGGTGCCC CAGGGCGAAT TCGTCGCGTT CACCGCGCTG ACGATCGCCG CGCTGGAGAA CGGCGTCGCG CCGGCGACGC CGTGGCTGCT GCTGGCGCTT GGCGGCCTCG CCGCATTGTC CGAACTGATC CGCCATTTCC GCGACCTGAC GCTGCGCCGC GTGGCACGGA TCGCGCTGTT CGATCTGGCG CTGCCGATCG CGCTGCTGCT GCTGACGCGA TGGATCGCCC CGATGAAGAT CGGGCAGGTC GGCAGCATCC TGCTCGCGGT GGCGCTGATC ACCCCGATGG GACCGATGCT GTATCGCATC GCGTTTGAAC CGATCGCGCA TTCCAGCGTG CTGGTGCTGC TGATGGCGTC GTTCGGCGTA CACTTTTCGC TGATGGGGCT GGGCCTTCTG TTCTTCGGCC CAGAAGGCAC CGGCACCACG CCGCTGTCGT CGCAATCATT TTCGCTCGGC GAGCTTCTGA TCACCGGGCA GAGCGTCGCG GTGCTCATCG TCACCGCCGT GCTGCTGTTG CTGTTCGCGC TGTTCTTCGG ACGCACCTTG CTCGGCAAGG CGTTGCGGGC TTGTTCTTCG AACCGCACCG GCGCGCGGCT GGTCGGCATC CCGATTTCGG CTGCGGGCCA GATCGCATTC GCGCTCGCCG CGCTGATCGG CGCGGTGTCC GGCGCGCTGG TCGGGCCGCT GATGACGGTG GCCTACGATT CCGGCTTCCT GATCGGGCTG AAAGCATTCG TCGCCGCCAT TCTCGGCGGG CTGGTGAGCT ATCCGCTGAC CGTGCTGGCA GCGCTCACCG TCGGCTTCGC CGAGGCGCTG TTTTCGTTCT GGGCCAGTAA CTTCAAGGAA GTGCTGGTGT TCACCCTGAT CATTCCGGTG CTGGCCTGGC GCTCGCTGGT CGCGCCGCAC GCCGAGGAGG CGGAATGA
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Protein sequence | MDTTIFLFLL QDGIINGAVY ALVAIALVLV FAVTRVILVP QGEFVAFTAL TIAALENGVA PATPWLLLAL GGLAALSELI RHFRDLTLRR VARIALFDLA LPIALLLLTR WIAPMKIGQV GSILLAVALI TPMGPMLYRI AFEPIAHSSV LVLLMASFGV HFSLMGLGLL FFGPEGTGTT PLSSQSFSLG ELLITGQSVA VLIVTAVLLL LFALFFGRTL LGKALRACSS NRTGARLVGI PISAAGQIAF ALAALIGAVS GALVGPLMTV AYDSGFLIGL KAFVAAILGG LVSYPLTVLA ALTVGFAEAL FSFWASNFKE VLVFTLIIPV LAWRSLVAPH AEEAE
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