Gene RPD_0776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0776 
Symbol 
ID4021250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp871259 
End bp872296 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content65% 
IMG OID637960966 
Productinner-membrane translocator 
Protein accessionYP_567915 
Protein GI91975256 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.300879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACACCA CGATATTCCT GTTTCTATTG CAGGACGGCA TCATCAACGG TGCGGTCTAT 
GCGTTGGTTG CCATTGCGTT GGTGCTGGTG TTCGCGGTCA CGCGCGTCAT CCTGGTGCCC
CAGGGCGAAT TCGTCGCGTT CACCGCGCTG ACGATCGCCG CGCTGGAGAA CGGCGTCGCG
CCGGCGACGC CGTGGCTGCT GCTGGCGCTT GGCGGCCTCG CCGCATTGTC CGAACTGATC
CGCCATTTCC GCGACCTGAC GCTGCGCCGC GTGGCACGGA TCGCGCTGTT CGATCTGGCG
CTGCCGATCG CGCTGCTGCT GCTGACGCGA TGGATCGCCC CGATGAAGAT CGGGCAGGTC
GGCAGCATCC TGCTCGCGGT GGCGCTGATC ACCCCGATGG GACCGATGCT GTATCGCATC
GCGTTTGAAC CGATCGCGCA TTCCAGCGTG CTGGTGCTGC TGATGGCGTC GTTCGGCGTA
CACTTTTCGC TGATGGGGCT GGGCCTTCTG TTCTTCGGCC CAGAAGGCAC CGGCACCACG
CCGCTGTCGT CGCAATCATT TTCGCTCGGC GAGCTTCTGA TCACCGGGCA GAGCGTCGCG
GTGCTCATCG TCACCGCCGT GCTGCTGTTG CTGTTCGCGC TGTTCTTCGG ACGCACCTTG
CTCGGCAAGG CGTTGCGGGC TTGTTCTTCG AACCGCACCG GCGCGCGGCT GGTCGGCATC
CCGATTTCGG CTGCGGGCCA GATCGCATTC GCGCTCGCCG CGCTGATCGG CGCGGTGTCC
GGCGCGCTGG TCGGGCCGCT GATGACGGTG GCCTACGATT CCGGCTTCCT GATCGGGCTG
AAAGCATTCG TCGCCGCCAT TCTCGGCGGG CTGGTGAGCT ATCCGCTGAC CGTGCTGGCA
GCGCTCACCG TCGGCTTCGC CGAGGCGCTG TTTTCGTTCT GGGCCAGTAA CTTCAAGGAA
GTGCTGGTGT TCACCCTGAT CATTCCGGTG CTGGCCTGGC GCTCGCTGGT CGCGCCGCAC
GCCGAGGAGG CGGAATGA
 
Protein sequence
MDTTIFLFLL QDGIINGAVY ALVAIALVLV FAVTRVILVP QGEFVAFTAL TIAALENGVA 
PATPWLLLAL GGLAALSELI RHFRDLTLRR VARIALFDLA LPIALLLLTR WIAPMKIGQV
GSILLAVALI TPMGPMLYRI AFEPIAHSSV LVLLMASFGV HFSLMGLGLL FFGPEGTGTT
PLSSQSFSLG ELLITGQSVA VLIVTAVLLL LFALFFGRTL LGKALRACSS NRTGARLVGI
PISAAGQIAF ALAALIGAVS GALVGPLMTV AYDSGFLIGL KAFVAAILGG LVSYPLTVLA
ALTVGFAEAL FSFWASNFKE VLVFTLIIPV LAWRSLVAPH AEEAE