Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0771 |
Symbol | |
ID | 4021245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 864476 |
End bp | 865318 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637960961 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_567910 |
Protein GI | 91975251 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACGGC TGAATGGCAA GGTTGCGGTG ATTACCGGTG CGACCAGCGG CATCGGTTTG CGGACGGCCG AAGTGTTCGT CGCCGAGGGC GCCAGCATCG TCATCGCCGG GCGCCGCGCG CCGGAGGGTG AAGCCCTCGC CGAGAAGCTT GGATCCTCCT GCGTCTTCAG ACAGACCGAC GTCACCCAGG AAGAACAGAT CAAGGCTCTG ATCGCGCAGG CGATCGACTC GTTCGGCCGG ATCGACTGCC TGTTCAACAA TGCCGGCGGG CCGGCCCAGA CCGGTGGCAT CGAGGGACTC GAGGTCGAGC GGTTCGACGC TGCGATGGCC ACGCTGGTCC GCAGCGTCAT GCTCGGGATG AAGCATGCCG CGCCGCATAT GAAGAAGCAG GGCTCCGGCT CGATCATTAA CAACGGCAGC ATCGCCGGCC GGCTCGCAGG GTTCTCGTCG TCGGTGGTGT ACGGCGCCGC CAAGGCCGCG GTGATCCACC TCACCCGCTG CGTCGCGATG GAGCTCGGAG AGTCCGGCGT CCGCGTCAAC AGCATATCGC CCGGCGCGAT CGCGACCGGG ATCTTCGGCA AGGCGCTCGG CCTTACCGTC GAAGCCGCGG AAAAAACCTC GGCGACGATG CGCGAGATTT ACAAGACCGC GCAGCCGATC CAGCGGGCGG GGTTGCCGGA GGACATCGCT CAGGCCGCGG TATTCCTCGC CAGCGACGAG TCCGGCTTCA TCAACGGCCA CGACCTCGTA ATCGACGGCG GCATTACCGG CGGCCGCAAC TGGACGCAGC AGCAGCAGGG CTACGTCGCG CTCCGCAAGG CGTTCGACCA TGGCGAAGGC TGA
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Protein sequence | MGRLNGKVAV ITGATSGIGL RTAEVFVAEG ASIVIAGRRA PEGEALAEKL GSSCVFRQTD VTQEEQIKAL IAQAIDSFGR IDCLFNNAGG PAQTGGIEGL EVERFDAAMA TLVRSVMLGM KHAAPHMKKQ GSGSIINNGS IAGRLAGFSS SVVYGAAKAA VIHLTRCVAM ELGESGVRVN SISPGAIATG IFGKALGLTV EAAEKTSATM REIYKTAQPI QRAGLPEDIA QAAVFLASDE SGFINGHDLV IDGGITGGRN WTQQQQGYVA LRKAFDHGEG
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