| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0748 |
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| Symbol | |
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| ID | 4021221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 839030 |
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| End bp | 840040 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637960937 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_567887 |
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| Protein GI | 91975228 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAA ACAAGACACT CCTCATCACC GGCGGAACAG GGTCTTTTGG CAACGCCGTC
CTTCACCGCT TCCTAAAGTC GGACTTCCAG GAAATCCGGA TCTTCAGCCG TGACGAGAAG
AAGCAGGAGG ACATGCGCAT CGCGCTGAAG GACGACCGCG TGAAATTCTA TATCGGGGAC
GTCCGCGATT ACGAAGCTGT CGATGACGCG ATCAACGGTG TCGACTACGT CTTCCACGCC
GCAGCCCTCA AGCAGGTTCC ATCCTGCGAG TTCTATCCGA TGGAAGCTAT CAGGACCAAT
GTGCTGGGCG CTGAGAACGT CATGCGGGCC GCCGTTAACC GCGGCGTCAG CAGGTGTGTT
GTGCTGAGCA CAGACAAGGC TGTCTATCCG ATCAACGCCA TGGGCATGTC AAAGGCGATG
ATGGAGAAGG TGATGGTAGC CAAATCCCGT CTCTGCCAGC CCGGACAGAC GATCCTCTGC
GCAACGCGTT ATGGCAATGT TATGGGGTCG CGCGGCTCGG TCATTCCTCT GTTCATTGAC
CAGCTGCAGC AGCGTAAGCC GCTGACGATC ACCGATCCCA GCATGACTCG CTTTCTCATG
TCACTGGAAG AGTCTGTCGA CCTGGTTCTT TACGCGTTCC AGAATGCTCG CGCCGGCGAC
ATATTCGTGC AGAAGGCCCC GGCCTCCACG GTCGGCGACC TCGCTTTCGC GCTACGTGAA
CTGCTCTCCC GAGACAATCC GATTAAGATC ATCGGCACCC GGCATGGCGA GAAGCTATAT
GAATCGCTGA TCTCGCGGGA AGAAATGCTT CGCGCCGAAG ATCTGGGTGA CTACTATCGC
ATTCCGGCCG ACAGTCGAGA CCTGAACTAC GACAAGTATT TCAGTGAAGG TGAGGTGCGC
ATTGAGACAA TTGACGACTA CACATCTCAC AATACGCATA GACTAGATAT TGAGGGCATC
AAGAAGACTC TGATGAAGCT CGACATCGTG AAGCGGGCTC TGAATGCTTA A
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| Protein sequence | MFENKTLLIT GGTGSFGNAV LHRFLKSDFQ EIRIFSRDEK KQEDMRIALK DDRVKFYIGD
VRDYEAVDDA INGVDYVFHA AALKQVPSCE FYPMEAIRTN VLGAENVMRA AVNRGVSRCV
VLSTDKAVYP INAMGMSKAM MEKVMVAKSR LCQPGQTILC ATRYGNVMGS RGSVIPLFID
QLQQRKPLTI TDPSMTRFLM SLEESVDLVL YAFQNARAGD IFVQKAPAST VGDLAFALRE
LLSRDNPIKI IGTRHGEKLY ESLISREEML RAEDLGDYYR IPADSRDLNY DKYFSEGEVR
IETIDDYTSH NTHRLDIEGI KKTLMKLDIV KRALNA
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