Gene RPD_0746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0746 
Symbol 
ID4021219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp836865 
End bp838133 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content56% 
IMG OID637960935 
Productglycosyl transferase, group 1 
Protein accessionYP_567885 
Protein GI91975226 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGCG TCGTCCAAAG GTCAGAGGCA ATAATCTTGA ATATATTGAT CGTCAGCCAG 
CATTTCTGGC CCGAGACATT CAGGATAAAC GAGGTGGTGA CATCTCTTTG TCGCGCCGGA
TGCCACGTAA CGGTGTTGGC TGGACAACCG AACTATCCCG AGGGAAGGGT CTTCAAGGGC
TACCGTGCCT CCGCCTTCGG AACAGAGATA CATCCGGAAG GCTACACTAT TGTCCGCATC
CCTGTAGTCC CAAGGGGAAA CAGCAGCGCG CTCGGCATGA TCGCAAACTA TATTTCATTC
GTTGTGACGG CCACGCTCAT TGGCCCCTGG CTATTGCGAG GCCGCCGGTT CGACGCGATT
TTTGTCTATG CAGTCTCGCC AATTTTGCAG GCCATTCCCG CAATAGCCAT CAAGTGGCTC
AAACGTGCGC CACTAACGGT TTGGGTGCAA GATCTTTGGC CGCAAAGCCT AGAGGTGACA
GGCTTCGTCA AAAATAAGTC CATTCTCGCG GCGGTCGGAA CTTTGACGCG TTGGATTTAT
CGGCGAAGCG ATCTGTTGCT TGTACAATCG CAGGGGTTTG TCCCCGAGGT CACAGCCATG
GCAGGAGAGG TGCCCGTGCG GTACCATCCC AACCCTGGCG ACCTTCAGGA CCAACGGTTT
TGGGGGGGCG ACAGGGTCTA TACGCTTCGC CCTGGATTCA ACGTAGTGTT TGCTGGCAAT
GTCGGTACCG CGCAATCGCC TGATACGCTT CTCAACGTCG CGCGCGAGCT ATCAAACCAG
CCCGATATTC GGATCGTTGT TGTCGGAACG GGCAGCCGCC TCGATTGGCT ACGTCAAGAG
GCGAAGGAAC AGCGCCTTGA CAACCTTGAA TTTGCCGGCA GGTTTCCGGC CTCCTACATG
GCTGGAATTT TTGCCCAGGC CTCAGCGCTC CTGGTTGTGT TGGGCAAAGG GACCATTCTT
ACGCAGACAG TTCCGAGCAA AGTTTCAAGC TATCTGGCAG CTGGAAAGCC AATCATTGGC
TCAATAGACG GTGAAGGTGC TCACGTGATC CGTGAGGCAG GTGCAGGCAT TGCGGTGCCC
GCTGAAGATG TCCACGCGTT GGCTTCAGCC ATTGTAGCCA TGCGTGACGC GGATGATGCG
ACGCGCCTCC GGTGGGGGCA GTCTGGGAAG AGATATTTTG ACGAGCATTT CGACCCCGAT
AAGCTCGCGT TGCGTCTTAG ATCATTGTTG CAGGAAGCCG GTGACAAGCG CGGCGACAAA
GGAAAATGA
 
Protein sequence
MSSVVQRSEA IILNILIVSQ HFWPETFRIN EVVTSLCRAG CHVTVLAGQP NYPEGRVFKG 
YRASAFGTEI HPEGYTIVRI PVVPRGNSSA LGMIANYISF VVTATLIGPW LLRGRRFDAI
FVYAVSPILQ AIPAIAIKWL KRAPLTVWVQ DLWPQSLEVT GFVKNKSILA AVGTLTRWIY
RRSDLLLVQS QGFVPEVTAM AGEVPVRYHP NPGDLQDQRF WGGDRVYTLR PGFNVVFAGN
VGTAQSPDTL LNVARELSNQ PDIRIVVVGT GSRLDWLRQE AKEQRLDNLE FAGRFPASYM
AGIFAQASAL LVVLGKGTIL TQTVPSKVSS YLAAGKPIIG SIDGEGAHVI REAGAGIAVP
AEDVHALASA IVAMRDADDA TRLRWGQSGK RYFDEHFDPD KLALRLRSLL QEAGDKRGDK
GK