Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0741 |
Symbol | |
ID | 4021214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 830237 |
End bp | 831925 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637960930 |
Product | circadian clock protein KaiC |
Protein accession | YP_567880 |
Protein GI | 91975221 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
TIGRFAM ID | [TIGR02655] circadian clock protein KaiC |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAG GCATCGCGAA ATCCCTTACC GGCATTGAAG GTTTCGACGA ACTGACGCTC GGCGGATTGC CGTCGGGGCG TCCCAGCCTG GTGTGCGGAT CGGCTGGCTG CGGCAAGACC CTGTTCGCGT CCACCTTCCT CATCAACGGC GCACGGCTGT ATGGCGAGCC GGGCGTGTTC GTCACCTTCG AGGAGCGTCC GGTCGACATC GTCGACAACG TGCAGTCGCT CGGCTTCGAC CTCCAGGAGT TGATCGATCA ATCGAGAGTT TTCATCGAGC ACATCGCGCT CGATCCGAGC GAGATCGCCG AGGTCGGCGA TTACGATCTC GAGGCGCTGT TCCTCCGGCT CGAGTACGCC GTCGACCAGA TCGGCGCCAA GCGGATCGTG CTCGATACGA TAGAGAGCCT GTTCTCGGCG TTTTCCAATC CCGCCGTGCT ACGCGCCGAA ATCCGCCGGC TGTTCGACTG GCTGAAGCAG AAGGGGCTGA CCGCCGTTAT CACCGGCGAA CGCGGCGACG GCACATTGAC CCGCCAGGGG CTGGAGGAAT ACGTCTCCGA CTGCGTGATT CTGCTCGACC ACCGCGTCGA CCAACAGATT TCGACGCGGC GGTTGCGTAT CGTCAAATAT CGCGGCACCG CGCACGGCAC CAACGAGTAT CCGTTCCTGA TCGACGAAGA CGGCTTCAGT GTGCTGCCGG TGTCGTCGCT CGGGCTTACG CACCAGGTAT TCGAGGAGCG GATCTCGACC GGCGTCAGGG ACCTCGACCG GATGCTGACC GGCGGCGGCT TCTATCGCGG CAACAGCGTC CTCGTCAGCG GCGTGGCCGG ATCCGGCAAG AGCTCGCTCT CCTGCATGAT GGCCGACGCA GCCTGCCGCC GTGGCGAGAA GGCGCTGTAT ATGTCCTTCG AGGAGTCCGA GGCCCAGACC GCGCGGAACA TGAAATCGGT CGGCACCGAT CTCGGGCCAT GGCTTGCGAG CGGTCAATTG CGCTACATCG CGGCGCGGCC GACCTTCTAC AGCCTGGAAA TGCATTTAGC CGTGATCCTG CGCGAGGTCA CGCGGTTCAA ACCCGATGTC GTCGTGCTTG ACCCGATCTC GGCGTTCCTC GGAACCGGCC AGATCGGCGA AGTGCAGGCG ATGTTGCTGC GGATCGTCGA TTACCTGAAA TCGAACGGCA TCACCGGCGT GTTCACCCAT CTCGCCCACG GCCAGGAAAC TCAGACCGAC GCCGGGCTGT CGTCGCTGAT GGATGCCTGG ATCTTGCTGT TGAATCGCGA AGCCCACGGC GAGTTCAATC GCGAGCTTTA TCTGCTGAAG GCGCGCGGCA TTTCGCATTC AAATCAGGTC CGCGAATTCG TGATGTCCGA CAACGGCATC CATTTGCTCG AGCCATATCT CGGAGAGGGC GGCGCGTTGA CCGGCTCGGC GCGGCGCAGC GCGGAGGCGC GGGCGCATCG GGCGGAGATC GAGCGCCAGA CCGAGGTGGC GCGCGTTCAG GGCGAGATCG CCCAGCGTCG CTCCCGCGCT CTGGCGCAGA TCGAGGCTTT GCAAGCCGAG ATCGATGCCG ACGAGTCCGA GCTGCGGCGG TTGGCGGAGA TCGAGGACAG ACACGTCAGG CAGACCGCAA TCGACTCGGA CACATTGGCG CGGAGCAGGG GCATCGATCA CGCTCCGCGC ACGAAGTAG
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Protein sequence | MTEGIAKSLT GIEGFDELTL GGLPSGRPSL VCGSAGCGKT LFASTFLING ARLYGEPGVF VTFEERPVDI VDNVQSLGFD LQELIDQSRV FIEHIALDPS EIAEVGDYDL EALFLRLEYA VDQIGAKRIV LDTIESLFSA FSNPAVLRAE IRRLFDWLKQ KGLTAVITGE RGDGTLTRQG LEEYVSDCVI LLDHRVDQQI STRRLRIVKY RGTAHGTNEY PFLIDEDGFS VLPVSSLGLT HQVFEERIST GVRDLDRMLT GGGFYRGNSV LVSGVAGSGK SSLSCMMADA ACRRGEKALY MSFEESEAQT ARNMKSVGTD LGPWLASGQL RYIAARPTFY SLEMHLAVIL REVTRFKPDV VVLDPISAFL GTGQIGEVQA MLLRIVDYLK SNGITGVFTH LAHGQETQTD AGLSSLMDAW ILLLNREAHG EFNRELYLLK ARGISHSNQV REFVMSDNGI HLLEPYLGEG GALTGSARRS AEARAHRAEI ERQTEVARVQ GEIAQRRSRA LAQIEALQAE IDADESELRR LAEIEDRHVR QTAIDSDTLA RSRGIDHAPR TK
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