Gene RPD_0735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0735 
Symbol 
ID4021208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp825744 
End bp826244 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content65% 
IMG OID637960924 
ProductFixH 
Protein accessionYP_567874 
Protein GI91975215 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5456] Predicted integral membrane protein linked to a cation pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.530597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCAT CGATCTCAAA GCCGCGACAA TTGACCGGCA AGGTCGTGCT CGCCATGCTG 
GTGACGTTCT TCGGCGTGGT GTTCGGCGTC AACGCGCTGA TGATGACGCT GGCGATCAAG
ACGCTGCCCG GCACCGAGGT CGACAGCGCC TATGCGGCGA GTCTCGCTTA TGAGAGCGAG
ATCGCTGCAG CGCGCGATCA GGACAAGCGC GGCTGGAGGG TCGACGCACA TGTGGAACGA
AAGCCGGACG GGCAGGCCGC GCTGCGGGTC GAGGCTCGCG ACAAGGCCGG ACTACCGCTG
GCCGGGCTGA AATTCTTCGG CCGGCTCGAG CGTCCGTCCG ACAAGCGCTT TGATCGCGAG
ATCGTGCTCG CGGAGGTCGG CGCCGGCGTC TATCGTGGAG ATGCGAGCGG CGTGCTGCCT
GGCCGCTGGG AGCTGGTCCT CGAAGGCGAT CAGGACGGCA TCCGCATGTT CCTGTCGAAA
AATCGCCTGG AGCTGAACTG A
 
Protein sequence
MSPSISKPRQ LTGKVVLAML VTFFGVVFGV NALMMTLAIK TLPGTEVDSA YAASLAYESE 
IAAARDQDKR GWRVDAHVER KPDGQAALRV EARDKAGLPL AGLKFFGRLE RPSDKRFDRE
IVLAEVGAGV YRGDASGVLP GRWELVLEGD QDGIRMFLSK NRLELN