| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0730 |
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| Symbol | |
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| ID | 4021203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 820706 |
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| End bp | 822352 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637960919 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_567869 |
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| Protein GI | 91975210 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.371164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAG CTCTCACACC GAAACGGATC ACCTTCGGCG AAGGTGGTCT GACGATCGTG
TTCACGCTGA CCACGGTGCT GTGCGTCTAC GCCTCGATCT TCGCGAAAGA CGCCCCGTTT
GCATTCCATG CCGCGCTCGG CGCCGCGTTC AGCGCCTGGG CGGTGTTCGC GATCATCACG
CGCTACAGCC GCCGCACCGG CCAGCCGCCG CAGGAAATCA ACGGCGTGCC GAACTACAAT
CTCGGCCCGA TCAAATTCCT GTCGTTCATG GCGATGTTCT GGGGCATCGC CGGCTTCACG
GTCGGCCTCT ACATCGCGCT CGAGCTCGCC TATCCCGGGC TGAACGTCGC CCAATGGGTC
AATTTCGGCA GGCTGCGGCC GCTGCACACG TCCGCGGTGG TGTTCGCCTT CGGCGGCAAC
GTGCTGCTCG CGACCTCGTT CTACGTGGTG CAGCGGACGA CGCGGGCTCG GCTCGCGGGC
GACCTCGCTC CGTGGTTCAT CGCGATCGGC TACAACTTCT TCATCGTCAT CGCCGGCACC
GGATATCTGC TGGGCGTCAC GCAGTCGAAG GAATACGCCG AGCCGGAATG GTACGCCGAT
TTGTGGCTGA CCATCGTCTG GGTCACCTAT CTGCTGGTGT TCGTCGCGAC CCTGATGAAG
CGCAAAGAGC CGCACATCTA CGTGGCGAAC TGGTTCTACC TCGCCTTCAT CATCACCATC
GCGGTGCTGC ATCTCGGCAA CAACCCGACG CTTCCGGTCA GCCTGCTCGG CTCGAAGTCC
TATATCGCCT GGGCCGGCGT GCAGGACGCG ATGTTCCAGT GGTGGTACGG CCACAACGCG
GTCGGCTTCT TCCTCACCGC CGGCTTCCTC GCGATCATGT ACTACTTCAT CCCGAAGCGG
GCGGAGCGGC CGGTCTATTC CTATCGGCTG TCGATCATCC ATTTCTGGGC GCTGATCTTC
CTGTATATCT GGGCCGGCCC GCACCATCTG CACTACACGG CGCTGCCCGA CTGGACGCAG
ACGCTCGGCA TGACCTTCTC GATCATTCTG TGGATGCCCT CGTGGGGCGG CATGATCAAC
GGCCTGATGA CGCTGTCGGG GGCCTGGGAC AAGCTGCGCA CCGACCCGGT GCTCCGCATG
ATGGTGGTGT CGGTCGCGTT CTACGGCATG TCGACCTTCG AAGGCCCGAT GATGGCGATC
AAGGCCGTCA ACTCGCTCAG CCACTACACC GACTGGACCA TCGGCCACGT TCACTCCGGT
GCGCTCGGCT GGGTCGGCTT CGTCTCGTTC GGCGCGCTGT ACTGCCTGGT GCCGTGGGTC
TGGGGCCGCA AGGAGCTCTA CAGCCTTCGC CTCGTCAACT GGCACTTCTG GATCGCCACG
CTCGGCATCG TGCTCTACAT CTCGGCGATG TGGGTGTCGG GTATCCTGCA GGGCCTGATG
TGGCGCGCCT ACACCTCGCT CGGCTTCCTC GAATACTCGT TCATCGAGAC CGTCGAGGCG
ATGCATCCCT TCTACGCCAT CCGCGCTGCC GGCGGAGGCC TGTTCCTGAT CGGCGCGCTG
ATCATGGCCT ACAATCTTTG GATGACGGTT CGCGTCGGCG AATCGTCAGA GGCCCAGCCG
CGCGTCGCCC TGCAGGCCGC CGAGTAA
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| Protein sequence | MNQALTPKRI TFGEGGLTIV FTLTTVLCVY ASIFAKDAPF AFHAALGAAF SAWAVFAIIT
RYSRRTGQPP QEINGVPNYN LGPIKFLSFM AMFWGIAGFT VGLYIALELA YPGLNVAQWV
NFGRLRPLHT SAVVFAFGGN VLLATSFYVV QRTTRARLAG DLAPWFIAIG YNFFIVIAGT
GYLLGVTQSK EYAEPEWYAD LWLTIVWVTY LLVFVATLMK RKEPHIYVAN WFYLAFIITI
AVLHLGNNPT LPVSLLGSKS YIAWAGVQDA MFQWWYGHNA VGFFLTAGFL AIMYYFIPKR
AERPVYSYRL SIIHFWALIF LYIWAGPHHL HYTALPDWTQ TLGMTFSIIL WMPSWGGMIN
GLMTLSGAWD KLRTDPVLRM MVVSVAFYGM STFEGPMMAI KAVNSLSHYT DWTIGHVHSG
ALGWVGFVSF GALYCLVPWV WGRKELYSLR LVNWHFWIAT LGIVLYISAM WVSGILQGLM
WRAYTSLGFL EYSFIETVEA MHPFYAIRAA GGGLFLIGAL IMAYNLWMTV RVGESSEAQP
RVALQAAE
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