| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0727 |
|---|
| Symbol | |
|---|
| ID | 4021200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 817829 |
|---|
| End bp | 818431 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637960916 |
|---|
| Product | DSBA oxidoreductase |
|---|
| Protein accession | YP_567866 |
|---|
| Protein GI | 91975207 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3917] 2-hydroxychromene-2-carboxylate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.422782 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.647229 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAGC CTGCCCCGCA ATTCCTGTTC GATTTCGGCA GCCCCAATGC GTTTCTCAGC
CACAAGGCGA TCCCGGCGAT CGAGCGGCGC ATCGGCGTGA AGTTCGAATA TGTGCCGGTG
CTGCTCGGCG GCATCTTCAA GGCGACCAAC AACAAATCGC CGGCCGAAAC CCTCGCCGGC
GTGAAGAACA AACGCGAATT CTACGCGCTG GAGACGGCGC GCTTCCTCCG GCGTTTCAAG
GTCGAGCCCT ATGTTTGGAA TCCGAACTTC CCGGTGAACA CGCTGAATTT GATGCGGACT
GCGGTCGCGG CGCAGCTCGA AGGCGTGTTC GAAAGATACG TCGAGGCGGC GTTCCATCAC
ATGTGGGTCG AGCCGAAGAA GATGGACGAT CCGGAGGTCG CGGCGCAGGC GCTGTCGTCG
TCGGGGCTCG ACGCCGCGAA GCTGTTCGCC CGTGCGCAGC AGCCGGAGGT GAAGGCCAGG
CTGATCGCCA ACACCGAAGA CGCGGTCGCT CGCGGCGCGT TCGGCTCGCC GACGTTTTTT
GTCGGCCAGG AGATTTTCTT CGGCAAGGAA CAGCTCCGCG AGGTCGAGGA GATGTACGCC
TAG
|
|---|
| Protein sequence | MTKPAPQFLF DFGSPNAFLS HKAIPAIERR IGVKFEYVPV LLGGIFKATN NKSPAETLAG
VKNKREFYAL ETARFLRRFK VEPYVWNPNF PVNTLNLMRT AVAAQLEGVF ERYVEAAFHH
MWVEPKKMDD PEVAAQALSS SGLDAAKLFA RAQQPEVKAR LIANTEDAVA RGAFGSPTFF
VGQEIFFGKE QLREVEEMYA
|
|---|
| |