| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0714 |
|---|
| Symbol | |
|---|
| ID | 4021187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 801988 |
|---|
| End bp | 803757 |
|---|
| Gene Length | 1770 bp |
|---|
| Protein Length | 589 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637960903 |
|---|
| Product | alkaline phosphatase |
|---|
| Protein accession | YP_567853 |
|---|
| Protein GI | 91975194 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1785] Alkaline phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.818593 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGTC TCGCCGCCAC CCTTGTTGCC GTGCTGGTGT TGAATTCGGC CGCCTCGGCG
CAGACGATCT ACCCGATCGA TCGCGCCGAG ATTCTCGCCG GCGCAAGATT CGACCTCAAG
GTCGAGTTCG CGGGCGAAGT CACTGCGGAC AAGGCGACAC TCACGATCGA CGGCGCGGAC
GCAGCCGCCG TCTTCGGGAA GATGCCGGAG CTGATCGCGC GCGAGGACGG CCGCCCGCAA
TCGGCGCTGC TGCTGCGCGA CGTGGTGCTG AGCAAGCCCG GCCGCTACAC GATCGAAGCC
GGCGACGGTA CCGATCGCCG CAGCGTGAGC TGGACGGTGT ACGACACCGG GCCGCGGCGG
GCGAAGAACG TCATCCTGTT CATCGGCGAC GGCCTGTCGC CGGCGCATCG CGTCGCCGCG
CGGCTGTTGT CGAAGGGCAT CGCCGAGGGT CGCGCCGGCG GCAAGCTCGC GATCGACGAC
ATGCCGCAGA TGGCGCTGGT GTCGACCGCC GGCAGCGATT CGATCATCAC CGATTCCGCC
AATGCCGCCA GCGCCTATGC CACCGGCCAC AAGGCCGCCG TCAATGCGAT GGGCGTCTAT
GCCGACCGTA CCGCCAGCCC GCTCGACGAC CCCAAGGTCG AGACGCTGGC CTCGCTGGCG
AAGCGGCGGC TCGGGCTGTC GATCGGCATC GTCACCAATA CCGAGATCGA GGATGCAACG
CCTGCGGCGG TGATCGCCCA TACCCGCCGC CGCACCGCCT ATGACGACAT CGTCGCGCAG
TTCTTCGCGG CGCAGCCCGA GGTGCTGATG GGCGGCGGCG CCGCGTATTT CCTGCCGAAG
AGCGGGCAGG GCAAGCGCAA GGACGATCTC GACTACCTGT CGAAATTCCG CGACGCCGGC
TACAGCGTCG CCACCAACGC CACCGAACTC GCGGCGGCCG GCAAGGCTGG TCCCGACAAG
GCTGGTCCCG GCAAGCTGCT CGGCCTGTTT GCGTCCGGCA ACATGGACGG CGTGCTCGAC
CGCCGCTTCC TCAAAGGCGG TGGGGTCGCG AAGAATCCGG ACCAGCCGGA TCTGACCGAA
CAGGTCGCGG TCGCGCTCGA CATCTTGTCG AAGAACGAGG CCGGCTTCTT CCTGATGGTC
GAATCCGGGA TGATCGACAA ATACGCCCAC GCGCTCGACA TGGAGCGCGC GGTCTACGAC
ACCATCATGC TCGACAATGC GGTGCGGCAG ACCCGTGACT GGGCCCGGGC ACGCGGCGAC
GACACCCTGA TCCTGGTGGT CGCCGATCAC AGCCATCCCA ACGCGCTGGT CGGCACCGTG
CGCGACGACC TCGCCGAGGG CGAGGACGCG CCGCTGCGCG AGCGGATCGG CGTGTATCAG
AGCGCCGGGT TTCCGAACTA TCCGGCGCCC GACAAGGACG GCTATCCGGA CCGCGTCGAC
GTCAGCCGCA GGCTCGCGAT CTTTTCCGCC AGCCTGCCCG ATCACTACGA GACGCTGCGG
CCGAAGCTCG ACGGCCCGAA CCAGCCGACC GAAGCCGGCG ACAAGCCCGG CACCTTCAAG
GCCAACGAGA AATACAAGGG CGTGCCCGGC GCGGTGCTGC GGCTCGGCAA TCTGCCGGCG
ATGATGAATG CCAGCGTGCA TTCCGGCGAG GACGTGATCC TGACCGCGGC GGGGCCTGGC
AGCGACCGGG TCCGCGGTTC GATGGAAAAC ACCGATGTGT TCCGGGTGAT GGCGGAGGCG
CTGGGGCTCG CAGCGGCTTC GGCGAAATAG
|
|---|
| Protein sequence | MMRLAATLVA VLVLNSAASA QTIYPIDRAE ILAGARFDLK VEFAGEVTAD KATLTIDGAD
AAAVFGKMPE LIAREDGRPQ SALLLRDVVL SKPGRYTIEA GDGTDRRSVS WTVYDTGPRR
AKNVILFIGD GLSPAHRVAA RLLSKGIAEG RAGGKLAIDD MPQMALVSTA GSDSIITDSA
NAASAYATGH KAAVNAMGVY ADRTASPLDD PKVETLASLA KRRLGLSIGI VTNTEIEDAT
PAAVIAHTRR RTAYDDIVAQ FFAAQPEVLM GGGAAYFLPK SGQGKRKDDL DYLSKFRDAG
YSVATNATEL AAAGKAGPDK AGPGKLLGLF ASGNMDGVLD RRFLKGGGVA KNPDQPDLTE
QVAVALDILS KNEAGFFLMV ESGMIDKYAH ALDMERAVYD TIMLDNAVRQ TRDWARARGD
DTLILVVADH SHPNALVGTV RDDLAEGEDA PLRERIGVYQ SAGFPNYPAP DKDGYPDRVD
VSRRLAIFSA SLPDHYETLR PKLDGPNQPT EAGDKPGTFK ANEKYKGVPG AVLRLGNLPA
MMNASVHSGE DVILTAAGPG SDRVRGSMEN TDVFRVMAEA LGLAAASAK
|
|---|
| |