| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0700 |
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| Symbol | |
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| ID | 4021173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 785853 |
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| End bp | 788183 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637960889 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_567839 |
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| Protein GI | 91975180 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0376627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.580851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCGG CGAGGCTTTC GTTCGCGGTG ACGTACCACG TTAACCGCGA GTCCTTGATG
TCTCCCTCCC AAACTGCTTC CGGGCGTAAT CGTCGCCTGT TGTCCTCTGT CGCCGTTGTC
GCATTGCTCT GGCCAACCAA CGGCTGGACC CAGATCGCCG CCATCTCTCG CGGCCTCGAT
CCGATCGTGG TCGAGGGCCA GACCGCGCGC GCCGCCAAGC CGCGCGCCGC GACCCGATCC
AGCGCCAGCG CGGCGCGTGC GCAGCGTGCT GCGACATCGC CGGCCGCGAC CAATCCGGCC
GCCACGCTGT CACCGACAGC GTCGGCCGCG CCGACCTTCA ACCTCGGCGC GCCGGCGAGC
AGCGCCAGCC GACTCAACCT GACGCCGCTG CAGACGCCGG CGAGCGTCGA AATCATCAAG
AGCGAGACCA TCGCCGAGCG CGGCCAGCGC AATGTGATCG ACGCGGTGAC GCAGAACGCC
ACCGGCTTCA CCGCGAGCCC GCAGCCCGGC AATGGCGGGT TGTCGTTCAC CACCCGCGGC
TTCGCCGGCA ACGGCACGGT GATGTCGCTG TATGACGGCA CGCGGATGTA TGTCGGCGCC
GGCACCATGA CCTTCCCGTT CGACACCTGG ACGGCGCAAC GGATCGAGGT GCTGCGCGGC
CCGGCTTCGG TGATGTATGG CGAAGGCGCG ATCGGCGGCG CCATCAACGT GATCTCGAAG
AAGCCGCTCG CCGTCCAGCG CAACGAGGCC GAGATCTCGC TCGACACCAA TCTGACGCGG
CGGCTCGCGG TCGACAGCGG GGGGCCGATC AACCCGAACG TCACCTACCG GCTGGCGGCG
ATCGGCAACA TGTCCGACGG CTGGGTCGAC CGCGACAATA CCTCGAACGT CGCCGTTTCC
GGCTCGGTGC GGGTGCAGGC CGCCGACAAC CTCGCTTTCA CGCTGAGCGA GGACTACGCC
GATCGCAGCC CGTCGCGCTA TTTCGGCACA CCGCTGGTGG GCGGCCGGCT CGACGAATCG
CTGCGGTTCC AGAACTACAA TGTCGGCGAC GCCGGCATCC GCTATCGCGA CAACTGGACC
CAGCTCAAAA CCGAGTGGGA CGTCTCCGAC AGCGTCTCGG TCAAGAACGT CAGCTATTAT
CTCAGCAGCC ACCGCCACTG GAAAAACGTC GAGAGCTACG CCTTCAGCCC CACGACGGGA
AACATCAACC GCAACTCCTA TATCGAGATC TTCCACGATC AGGAGCAGAT CGGCAGCCGC
ACCGACGCGA CTTTCCGCGG CCATCTGTTC GGGCTCGCCA ACCAGTTCGT GGCGGGCTTC
GACGTCAACC GGATCGCGTT CACGTCCACC AACAACTCGC CTTATGCGGG CGCGTCGTCG
GTCTCGCGGT TCAATTTCGA TCCGGGCGCG TTCCTGCCTG TCAGCCCGAC CCGGCCCGGC
TTTCATACGC TGACCACGCA ATACGGTGTG TTCGCCGAGA ACCGCCTCAG CCTGACCGAT
CAGTTGGCGG TGGTCACCGG CATCCGTTCC GATCAGCCGA CCGTCGAGCG CACCGACTTC
CTGACGCCGT CGGCGAGCTT CGAGAAATCC TATTCGGCGC CGAGCTGGCG CGCCGGGCTG
GTCTACAATC CGATCCCGGA TTTTGCGATC TACGGGCAAT ATTCGACGGC GGTCGATCCG
GTCACCAATC TGATCACCAT GACGGGCGTC AATCGCGATT TCGCGCTGTC GACCGGCAAG
CAGATCGAGG TCGGCGTCAA GCAATCGCTG GCCGGCGGCC GCGCCGAGTG GACGCTGGCG
GGTTATCAGA TCGTCAAGAA CAATCTCCTG GCGCGCGATC CGCTCAATCC CGCCAACACC
AACCCGCTGC AGATCGGCCA GCAATCCTCG CGCGGCATCG AGGCGTCCGC CGGGCTCATC
GTCGTGGACG GGCTGCGGCT CGACGCCAAT GTCGCCTGGC TGCGCGCCCA ATATGACGAC
TTCACCCAGG TGGTCGGCGG CCGGGCGGTG AACTATGCGG GCAATGTGCC GGCCAACGTG
CCGCAACTGG TCAGCAACAT CTGGGCGACG TGGGCGTTCG CGCCGAACTG GTCGGCCAAT
GCCGGCGTTC AACTGGTCGG GCAGACCTTC GCCGACAACG CCAACACGCT GACGCGGCCG
GCCTACGGCC TCGTCAATGC GGGTCTGAGC TGGAAGCCGG ATGCGCGGCA GACGCTGTCG
CTGCGGATCT ACAATCTGTT CGACACGGTC TACACGACGT CGGGCAACAC CACGCAATGG
ATGCTCGGAA TGCCGCGCAC CGCGGAGCTC TCGTACAACG TCAAGTTTTG A
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| Protein sequence | MAAARLSFAV TYHVNRESLM SPSQTASGRN RRLLSSVAVV ALLWPTNGWT QIAAISRGLD
PIVVEGQTAR AAKPRAATRS SASAARAQRA ATSPAATNPA ATLSPTASAA PTFNLGAPAS
SASRLNLTPL QTPASVEIIK SETIAERGQR NVIDAVTQNA TGFTASPQPG NGGLSFTTRG
FAGNGTVMSL YDGTRMYVGA GTMTFPFDTW TAQRIEVLRG PASVMYGEGA IGGAINVISK
KPLAVQRNEA EISLDTNLTR RLAVDSGGPI NPNVTYRLAA IGNMSDGWVD RDNTSNVAVS
GSVRVQAADN LAFTLSEDYA DRSPSRYFGT PLVGGRLDES LRFQNYNVGD AGIRYRDNWT
QLKTEWDVSD SVSVKNVSYY LSSHRHWKNV ESYAFSPTTG NINRNSYIEI FHDQEQIGSR
TDATFRGHLF GLANQFVAGF DVNRIAFTST NNSPYAGASS VSRFNFDPGA FLPVSPTRPG
FHTLTTQYGV FAENRLSLTD QLAVVTGIRS DQPTVERTDF LTPSASFEKS YSAPSWRAGL
VYNPIPDFAI YGQYSTAVDP VTNLITMTGV NRDFALSTGK QIEVGVKQSL AGGRAEWTLA
GYQIVKNNLL ARDPLNPANT NPLQIGQQSS RGIEASAGLI VVDGLRLDAN VAWLRAQYDD
FTQVVGGRAV NYAGNVPANV PQLVSNIWAT WAFAPNWSAN AGVQLVGQTF ADNANTLTRP
AYGLVNAGLS WKPDARQTLS LRIYNLFDTV YTTSGNTTQW MLGMPRTAEL SYNVKF
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