Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0698 |
Symbol | |
ID | 4021170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 781739 |
End bp | 782983 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637960887 |
Product | amine oxidase |
Protein accession | YP_567837 |
Protein GI | 91975178 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1231] Monoamine oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.613915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACAGC AACGCCTTCC CTCTTCCGTC GACATCGCCA TCATCGGCGC GGGCGCGGCC GGCCTCGGCG CGGCGCGGAC GCTGGAAGGC TCCGGCCTGT CGGTGATCGT GCTGGAAGCG CGCGACCGGA TCGGCGGCCG CGCCTTCACC CGAATGGTGA CGCCCGAGAT CGCCTTCGAT GTCGGCTGCG GCTGGCTGCA TTCGGCAGAC GAGAATTCGT TCGTCGGGAT CGCCAGAGAC CTGGGCGTCG ATATCGACAC CACGCATCCG CCGTGGAGCG AGCGCAGCTT CGGTGACGTG TTTCCGCCGC GCGAGCGCGC CGCGTTCAGC AAGGCGCTGG ACGCGTTCTA CGAGCGGGTC TGGCGCGCCG CAAAGCGCAA GACCGATGCG CCCGCTGCGA CTTTGCTGGA GCCCGGCAAT CGCTGGAACG CGATGATCGA CGCGGTGTCG ACCTGGGTCA ACGGCGCCGA ACTGGAGCGC GTATCGGTCA AGGACGTCGA GGCCTATCGC GACACCGGCA TCAACTGGCG GATTCGCCAA GGCTACGGCG CGCTGATCGC GGCCTATGGC GCACACTGCC CGGTCGCGCT GAATTGCGCG GTCAGCGTGA TCGATCATTC CGGCCCGCAG GTGAAGTTCG AAACCTCGCA AGGCACGCTC ACCGCCGGCA AGGTGATAAT CACCGTGCCG ACCAATCTGA TCGCCGACGA GGCGATCCGC TTCACGCCCG AACTGCCGGA CAAGCTCGCG GCGGCGCGCG GGCTACCGCT CGGGGCCGAC GCCAAGGTGA TGCTGCAACT ATCCGATCCG AACGACTTTC CCGCCGACGG CAATCTGCGC GGCGCGACCA TGCGCACCGC GATCGGGACT TATCACTTGC GGCCGTTCGG CCACGACGGC GTCGAGGGAT TTTTCGGCGG CCGCTTCGCC CGCGAACTGG AACAGGCCGG CGACGGCGCA CTGGCGGCGC AGAGCATCGA CGAGATCGCC GGCCTGCTCG GCAACGACAT CCGCCGCAAG CTCAAGCCGC TCGCGGAATC GCGCTGGACG CACGATCCGT TCGCGCGCGG CTCCTACTCG CACGCACTGC CCGGCCATGC CGGCGCCCGC GCCGTGCTGG CGGCGCCGGT CGACGGCCGG CTGTTCTTCG CCGGCGAAGC CACCTCGCCG CAATTCTTCT CCACCGCCCA CGGCGCGAGG GACTCGGGTG AGCGGGCGGC GCGGGAGATC ATCGGCCACG CGTAG
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Protein sequence | MSQQRLPSSV DIAIIGAGAA GLGAARTLEG SGLSVIVLEA RDRIGGRAFT RMVTPEIAFD VGCGWLHSAD ENSFVGIARD LGVDIDTTHP PWSERSFGDV FPPRERAAFS KALDAFYERV WRAAKRKTDA PAATLLEPGN RWNAMIDAVS TWVNGAELER VSVKDVEAYR DTGINWRIRQ GYGALIAAYG AHCPVALNCA VSVIDHSGPQ VKFETSQGTL TAGKVIITVP TNLIADEAIR FTPELPDKLA AARGLPLGAD AKVMLQLSDP NDFPADGNLR GATMRTAIGT YHLRPFGHDG VEGFFGGRFA RELEQAGDGA LAAQSIDEIA GLLGNDIRRK LKPLAESRWT HDPFARGSYS HALPGHAGAR AVLAAPVDGR LFFAGEATSP QFFSTAHGAR DSGERAAREI IGHA
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