Gene RPD_0675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0675 
Symbol 
ID4021146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp758938 
End bp759309 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content65% 
IMG OID637960863 
Productputative monovalent cation/H+ antiporter subunit C 
Protein accessionYP_567814 
Protein GI91975155 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1006] Multisubunit Na+/H+ antiporter, MnhC subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.719321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCC TGGTCGCGAG CGGCATCGGC GTGCTGACCA TGGTCGGGCT GTATCTGGTG 
CTGAACCGGC ACAGCTTCCC GGTGATCATC GGCACCACGT TCCTGTCCTA TGCGGTCAAT
CTGTTCCTGT TCGCGATGGG ACGGCTTTCG ATCGACAAGC CGCCGATCAT CACCAAGGGC
GTCACCGACT ACACCGACCC GCTGCCGCAG GCGCTGGTGC TGACCGCGAT CGTGATCTCG
TTCGGGATGA CGGCGCTGGT GGTGGTGCTG GCGCTGCGCG GATTCCTCGA GACCGGCACG
GAGCGGGTCG AGAACGGCGA AGGATCGCCG TCGCCGAACG ACCCACGCAA GCGCAAGGCG
GCGCGCCGAT GA
 
Protein sequence
MEILVASGIG VLTMVGLYLV LNRHSFPVII GTTFLSYAVN LFLFAMGRLS IDKPPIITKG 
VTDYTDPLPQ ALVLTAIVIS FGMTALVVVL ALRGFLETGT ERVENGEGSP SPNDPRKRKA
ARR