Gene RPD_0664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0664 
Symbol 
ID4021135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp748667 
End bp749272 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content67% 
IMG OID637960852 
Productpotassium-transporting ATPase subunit C 
Protein accessionYP_567803 
Protein GI91975144 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2156] K+-transporting ATPase, c chain 
TIGRFAM ID[TIGR00681] K+-transporting ATPase, C subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.978745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAAG AAATTCGCCC CGCACTCGTC GTTCTCGTCG TGCTGACGGT CATCTGCGGT 
CTTGCCTATC CGCTGGCCAT GACCGGTATC GCCGGGGTGC TGTTCCCGGA GCAGGCCGCC
GGAAGCCTGA TCGTCAAGGA CGGCGCCGTG ATCGGTTCGG CGCTGATCGG CCAGGAGTTC
AAGGACGACA AGTACTTCCA CGGCCGCCCG TCGGCGACCT CGGCGGCTGA CCCCGCCGAT
CCGACCAAGA CGGTGTCATC GCCCTACAAC GCCGCCAACT CCAGCGGCTC CAATCTCGGG
CCGACCAGCA AGGCGCTGAA CGACCGCGTC AAGGAAGACG TCGACAAGCT CAAGGCCGAG
AACCCCTCGG CCGCGGTGCC GGTCGATCTG GTCACCGCCT CGGGCAGCGG ACTCGACCCC
GAGATTTCGC CGGAGGCCGC TTTGTTTCAG GTGCCGCGCG TCGCCCGTGC CCGCGGTCTG
TCTGAAGACG GCGTCCGCAA GCTGGTGAAC GCGCAGACCA AGGGCCGCTT CGCCGGCCTG
CTCGGTGAGC CCCGCGTGAA CGTGCTTGCG CTCAATCTGG CGCTGGATGC GACCACCAGG
AAGTAG
 
Protein sequence
MLKEIRPALV VLVVLTVICG LAYPLAMTGI AGVLFPEQAA GSLIVKDGAV IGSALIGQEF 
KDDKYFHGRP SATSAADPAD PTKTVSSPYN AANSSGSNLG PTSKALNDRV KEDVDKLKAE
NPSAAVPVDL VTASGSGLDP EISPEAALFQ VPRVARARGL SEDGVRKLVN AQTKGRFAGL
LGEPRVNVLA LNLALDATTR K