| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0658 |
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| Symbol | |
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| ID | 4021129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 742397 |
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| End bp | 743344 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637960846 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_567797 |
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| Protein GI | 91975138 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACC CGATCAATTC TTCGACGCCA TGGCTGACCG GCTTCATCGC CGACCTGCCC
ACGCCCTTCG ACGCCAACGA CCGGATCGAC TGGGGCTCCT TCGAAATGTT GTGCGAGCAG
CAGATCCGAT CGGGGGCGAG AGCGGTTCTC GTCGCCGAGA CGATGGGCGA GGCGTCCACG
CTGACTCTCA CCGAGCATGA CGCGCTGATC GGCGCGGCGG TGGCGATTTC CTGCGGACGC
GTCGCGGTGA TCGCCGGTGC GGGTTCGAAC TCGACCAGTC AGGCGATCGA CCTGACGCGG
CGCGCCGAAG CGAATGGCGC CGACGCCGTG ATGTCGGTGG TGCCTTACTA CAACAAGCCG
ATGCAAAGCG GCATCGTCGC GCATTTCAGC GCGATCGCCC AGGCGACCGC GCTGCCGATC
ATACTGCACG ATGCGCCGGG ACGGACGGCG CGGGAGCTCT CCGACGAAAC GATGCAACGG
CTCGCGGACA TCCCGCGATT CGCCGGCGCC AAAGACGCCA CCGGCGATAT CGCGCGCCTC
GTTCGCCTGC GATCGAAACT TCCGCCGGAC TTCCATCTGC TGTCCGGCGA CGACTCCACC
GCCGGCGCTT ATCTGGCGGC TGGCGGCGAT GGCTGCGTGT CGATCCTGTC GAACATCGCA
CCGGATCTTT GCCGATCGAT CTACCAATAT TGTCGGCAGG CGGATCTGGT CAGCTCCAGG
ACGCTCGCCG CGCATCTCGC GCCGCTCGGC CAGGCGGTCC TGCCCGATGC GACGCCGGCC
GCGCTGAAAT ACGCGCTGTG CCTGCTCGGC CTTGCGGCGC CGTGGGTTCG GCTTCCGCTC
GTCGAGCTCG ACCAATCCGC CAAGATGGCG GTGGCCAAGG CAGTCGCCGG CGTTTTCCTG
TCGTATCGCG GCTACGGCGG AGAACACCGG GATCTCATCG CGGTGTGA
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| Protein sequence | MTNPINSSTP WLTGFIADLP TPFDANDRID WGSFEMLCEQ QIRSGARAVL VAETMGEAST
LTLTEHDALI GAAVAISCGR VAVIAGAGSN STSQAIDLTR RAEANGADAV MSVVPYYNKP
MQSGIVAHFS AIAQATALPI ILHDAPGRTA RELSDETMQR LADIPRFAGA KDATGDIARL
VRLRSKLPPD FHLLSGDDST AGAYLAAGGD GCVSILSNIA PDLCRSIYQY CRQADLVSSR
TLAAHLAPLG QAVLPDATPA ALKYALCLLG LAAPWVRLPL VELDQSAKMA VAKAVAGVFL
SYRGYGGEHR DLIAV
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