Gene RPD_0648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0648 
Symbol 
ID4021119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp732250 
End bp733221 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content72% 
IMG OID637960836 
Producthypothetical protein 
Protein accessionYP_567787 
Protein GI91975128 
COG category[R] General function prediction only 
COG ID[COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAATT ATCGCGCGCC GTGGTGGTTG CCCGGCGGCC ATCTGCAGAC GATCTGGCCG 
ACGCTGTTCG CGCGGCCGCG GCCGGCCGAG GCGTTGCGGA TGGGGCGCGA CCGCTGGCGC
GCGCCGGACG GCGATTTCAT CGATGTCGAC CATCTGCCGG GCGCCGACGG CGCGCCGTGG
CTGGTGCTGT TTCACGGCCT CGAGGGCAGT TCCTCGAGCC GCTACGCGAT CGCCTTCGCG
CAGGCGGCGC GGGCGCGCGG CTGGCGTTTC AGCGTGCCGC ATTTTCGCGG CTGCTCGGGC
GAGATCAACC TCGCGCCGCG CTCCTATCAC TCCGGCGATT TCGAGGAGAT CGGCTGGATG
CTCGGCCGGA TTCGCGAACG CGCGGGCAGG CCGGTGTTCG CCGCCGGCGT CTCGCTCGGC
GGCAATGCGC TGCTGCGCTG GACCGAGGAG GCGGGCGAGA GCGCCGCGCA GACCGTGCGG
GCGGTGGCGG CGATCTCGGC GCCGCTCGAT CTGATCGCCG CGGGGGCTGC GATCGATACG
GGCCTCAACC GGCAGATCTA CACGCGCAAC TTCCTGCGCA CGATGAAGCC GCGCGCGCTG
GCGAAATGGC GACAGCATCC CGGCCTGTTC GACCGCGACA AGCTCACCGC CGCCACCACG
CTGCGCGCCT TCGACGACGC CTTCACCGCG CCGCTGCACG GCTTCCGCGA CGTCGACGAT
TATTGGACGC GGGCCTCGTC GCAGCCGCAT CTGCACCGGA TCCGCGTGCC GGCGCTGGTG
ATGAATGCGC GCAATGATCC GTTCGTGCCG GGCGCCTCGC TGCCGGCTCC GCATCAGGTC
GGCGACAACG TCACGCTGTG GCAGCCGGAC GACGGCGGCC ATGTCGGCTT CGCCGGCGCG
CCCTGGCCGG GGCACGTTCA CGCCATGCCG GAGGCGGTGT GCGACTGGTT GGCGGACCGC
GCGACGACCT GA
 
Protein sequence
MRNYRAPWWL PGGHLQTIWP TLFARPRPAE ALRMGRDRWR APDGDFIDVD HLPGADGAPW 
LVLFHGLEGS SSSRYAIAFA QAARARGWRF SVPHFRGCSG EINLAPRSYH SGDFEEIGWM
LGRIRERAGR PVFAAGVSLG GNALLRWTEE AGESAAQTVR AVAAISAPLD LIAAGAAIDT
GLNRQIYTRN FLRTMKPRAL AKWRQHPGLF DRDKLTAATT LRAFDDAFTA PLHGFRDVDD
YWTRASSQPH LHRIRVPALV MNARNDPFVP GASLPAPHQV GDNVTLWQPD DGGHVGFAGA
PWPGHVHAMP EAVCDWLADR ATT