Gene RPD_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0643 
Symbol 
ID4021114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp729952 
End bp730470 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content70% 
IMG OID637960831 
Producthypothetical protein 
Protein accessionYP_567782 
Protein GI91975123 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.595512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGA TCACCCGCGT GTTCGACAAT CCCGGCCGGG CCCGGGCCGC GCTCGACGAA 
TTGAAGGCGC AGCGGTTCGA CAGCGCCGAA ATGGTGGCTG GACCCGAAGG ACGCGGTCAG
ACGCTGCTGC GGGTCGAGGC GCCGTTCGGC ACCGCGATCC GGGTCGAGGA GATCCTCGAC
CGCCACGCCA ATGCCGGGAC GCCCGCTCCG ACCGCGGCAG CGGCCAAACC TGCTGTGACG
GCTGCGCCGC CGCAAGCGGC CCAGCCACCG AGCCGGCTCC CTGCAGCCAA GACGGAACCG
GCCAAATCCC CGTCAGCCGA GCCCGCCGCG CCAGCGCGCA AGCTCGACGT GGACAGGGTG
GCCAGCCGCC CGCGCACGCT GTCGCAGATC CTCGGCATTC CCGAGCTGAT CGATTCCGAT
ACGTTCTTCT CCGGCTTCCC GCTCCTGATC CGGCCCGCGC CGAAACGGGC GAAGGCGGAA
GAGCCTGTCG CGAAGCAGCC TGTCGCGAAG CCGAACTGA
 
Protein sequence
MTQITRVFDN PGRARAALDE LKAQRFDSAE MVAGPEGRGQ TLLRVEAPFG TAIRVEEILD 
RHANAGTPAP TAAAAKPAVT AAPPQAAQPP SRLPAAKTEP AKSPSAEPAA PARKLDVDRV
ASRPRTLSQI LGIPELIDSD TFFSGFPLLI RPAPKRAKAE EPVAKQPVAK PN