Gene RPD_0641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0641 
Symbol 
ID4021112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp728795 
End bp729496 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content70% 
IMG OID637960829 
ProductCob(II)yrinic acid a,c-diamide reductase 
Protein accessionYP_567780 
Protein GI91975121 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID[TIGR02476] cob(II)yrinic acid a,c-diamide reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.614962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGC TCGACAACAA GGCGCCCGGA ATGATCGACC CGCAGGCCGC CGCGGCCGCC 
AACGCCAACC CGCCGGTGTT CGACGCAGCG TTTCAGGCCC GGTTCGCCGA ATTGCTCGCA
TGGCGGCGCG ATGTGCGCCG CTTCCGCCGC GACGGCGTCG ATCCGGCGCT GATCGAGCAT
CTGCTCGATC TCGCGCAGCT CGCGCCGTCG GTCGGCAACA GCCAGCCGTG GCGCTGGGTC
AGCGTCGACA GCGCCGCGAC CCGCGACAAG GTGCGCGCCA ACTTCCTGCG CTGCAACGAG
ATCGCGGCCG GCGCCTATCA GGGCGAACGC GCCGCGTTGT ATGCGCGGCT CAAGCTCGAA
GGCATCGACG TCGCACCCCG GCAGTTCGCC TTGTTCTGCG ATCGAGGCAC CGCGCAGGGC
CTCGGCGTCG GCCGCCAGAC CATGCCGGAG GCGCTCGATT ACTCCGTCGT CGCGATGATC
GAAACCTTCT GGCTCGCGGC GCGGACCCAC GGTCTCGGCG TCGGCTGGGT CTCGATCCTC
GATCCGCAGG CGATCACCAC CGAACTCGAC GTGCCCGCCG GTTGGAAGTT CATCGCCTAT
CTGTGCGTCG GCTGGCCGGT CGAACAACAT GTCGATCCGG AGCTGGTGCG GCATCACTGG
CAGGACCGCA CCTCGGCCGG GCGCGACGTC CTGTCGCGCT GA
 
Protein sequence
MSALDNKAPG MIDPQAAAAA NANPPVFDAA FQARFAELLA WRRDVRRFRR DGVDPALIEH 
LLDLAQLAPS VGNSQPWRWV SVDSAATRDK VRANFLRCNE IAAGAYQGER AALYARLKLE
GIDVAPRQFA LFCDRGTAQG LGVGRQTMPE ALDYSVVAMI ETFWLAARTH GLGVGWVSIL
DPQAITTELD VPAGWKFIAY LCVGWPVEQH VDPELVRHHW QDRTSAGRDV LSR