Gene RPD_0631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0631 
Symbol 
ID4021101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp716493 
End bp717275 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content70% 
IMG OID637960819 
ProductABC transporter related 
Protein accessionYP_567770 
Protein GI91975111 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.17434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC CGGCCCTTCT GGTCGCGCGG AATTTAGGCG TCGCGTTGTC CGGTCGCGAG 
GTGCTTCACG GCCTGTCGCT GGACTTGACG CGCGGCCATC TCGTCGCGCT GGTCGGTCCG
AACGGAGCCG GCAAAACCAC GCTGCTGCGG GCGCTCGCGG GACTGATCGA ATCGCGCGGC
GAGGTGACGA TCGGCGGCGA TGGATTGTCG AAGCTGGCGC TGCGCCAGCG CGCCAAGCGC
TTCGGCTATC TGCCGCAAGG TCATCTGGTG CATTGGCCGC TGCCGGTGCG CGACGTCGTC
GCGCTCGGAC GCTTTCCGCA CGGCGCGACG GATCCGGCGC GGCTGTCGCC GTACGATGCC
GAGGCGGTCG CCCGCGCGAT GCGGGTCACC GATGTTGCGC GCTTCGCCGA TCGCAACGTC
AATGAACTGT CCGGCGGCGA GCGCAGCCGC GTCGCGCTGG CGCGGGTGCT GGCGGTCGAG
GCGCCGGTGG TGCTGGCGGA CGAGCCGACC GCGTCGCTCG ATCCGCGCTA TCAGCTCGAC
GTGATGCAGA CGCTGCGCCA GGCGGCCGAT GCCGGCACGC TGGTGATCGT GGTGACTCAC
GACCTCGGTC TCGCGGCGCG CTTTGCCGAT ACTGTTCTGG TGATGGCGGA TGGACGGCTT
GCGGCGCAGG GCGCGCCGCA TCAGGCGCTG TCCGATGCCG TCCTGCAGCA GGTGTTTCGC
GTCAGCGCCT ATCGGGCCGA TTATCAGGAC AGCGGCGTGA TCCTGCCCTG GACCGGGGTC
TGA
 
Protein sequence
MTEPALLVAR NLGVALSGRE VLHGLSLDLT RGHLVALVGP NGAGKTTLLR ALAGLIESRG 
EVTIGGDGLS KLALRQRAKR FGYLPQGHLV HWPLPVRDVV ALGRFPHGAT DPARLSPYDA
EAVARAMRVT DVARFADRNV NELSGGERSR VALARVLAVE APVVLADEPT ASLDPRYQLD
VMQTLRQAAD AGTLVIVVTH DLGLAARFAD TVLVMADGRL AAQGAPHQAL SDAVLQQVFR
VSAYRADYQD SGVILPWTGV