| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0629 |
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| Symbol | |
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| ID | 4021099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 714391 |
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| End bp | 715464 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637960817 |
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| Product | high-affinity nickel-transporter |
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| Protein accession | YP_567768 |
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| Protein GI | 91975109 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3376] High-affinity nickel permease |
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| TIGRFAM ID | [TIGR00802] high-affinity nickel-transporter, HoxN/HupN/NixA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.349464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAGA CGATCACGCA AAAGACTGCA CTTTCCGCTC CATCCGATGG ATTTCGCATT
CGGCTGGTCG CCTTGCTCGG CGGGTTGGTC ATCGCCAACA TTGCCGCCTG GGCCTGGGCG
CTGACCGCTT TCGCCGGCCA GCCGGTGCTG ATCGGCACCG CGGTTCTGGC CTACAGCCTC
GGCCTTCGCC ATGCGCTCGA CGCCGACCAC ATCGCGGCGA TCGACAACGT CACCCGCAAG
CTGATGCAGG AGGGCAAGCG CCCGATCGCG GTCGGGTTCT TCTTTGCGCT CGGTCATTCC
ACGGTGGTGC TGGTGGCGTC GCTGGCGATC GCGCTGGCGG CCAGCTCGTT GACGGAACGC
TTTTCCGGCT ATCGCGAAAT CGGCGGGGTG ATCGGCACCT CGGCATCGGC GCTGTTCCTG
TTTGCGATCG CGATCGCCAA TCTGTCGGTG TTGAGCGGCG TCTACCGCGC CTTCAAGAAG
GTGCGCGCCG GCGAGGTGGT GCATGACGAC GACATCGACG CGCTGCTGCA GCAGCGCGGC
TGGCTGGCGC GGCTGTTCAG GCCGCTGTTC CGCTTCGTCT CCAAGAGCTG GCAGCTGTAT
CCGATCGGGC TATTGTTCGC GCTCGGCTTC GAGACGGCGA GCGAGATCAG CCTGTTCGGC
CTCGCCGCCA ACGCGTCGGG AACCATCTCG CACTGGTCGA TCCTGATCTT CCCCGCGCTG
TTCGCCGCCG GCATGACGCT GGTCGACACC CTCGACGGCG TGCTGATGCT CGGCGCCTAT
GGCTGGGCCT ATCGCAACCC GGTGCGCAAG CTGTACTACA ACATGACCAT CACCTCGGTC
TCGGTGCTGG TCGCGATCGT GATCGGCGGC ATCGAAACGC TCGGGCTGAT GGCCGGGCGC
CTGCATCTCG AAGGCGCTTT CTGGGAGTGG ATTTCCGATC TCAACGCCAA TTTCGGGACG
CTCGGCTACG GCATCGTCGC GCTGTTCGTC GCGAGCTGGA TCATCTCGAC CATCATCTAT
CGCGCTAACG GCTATCACAG GCTCGACGAA AGAGCGCCCG TGGTGCAGGA ATGA
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| Protein sequence | MSETITQKTA LSAPSDGFRI RLVALLGGLV IANIAAWAWA LTAFAGQPVL IGTAVLAYSL
GLRHALDADH IAAIDNVTRK LMQEGKRPIA VGFFFALGHS TVVLVASLAI ALAASSLTER
FSGYREIGGV IGTSASALFL FAIAIANLSV LSGVYRAFKK VRAGEVVHDD DIDALLQQRG
WLARLFRPLF RFVSKSWQLY PIGLLFALGF ETASEISLFG LAANASGTIS HWSILIFPAL
FAAGMTLVDT LDGVLMLGAY GWAYRNPVRK LYYNMTITSV SVLVAIVIGG IETLGLMAGR
LHLEGAFWEW ISDLNANFGT LGYGIVALFV ASWIISTIIY RANGYHRLDE RAPVVQE
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