Gene RPD_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0627 
Symbol 
ID4021096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp711847 
End bp713070 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content66% 
IMG OID637960815 
ProductS-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase 
Protein accessionYP_567766 
Protein GI91975107 
COG category[I] Lipid transport and metabolism 
COG ID[COG5379] S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAC AGCAGCTCAT CGCGGATGCA GTCCGCAACA GCAAGGATCG CAGCGAGTCG 
ACGATCTGGG ATCGTCTGTT TTCGATCTGG TTCCGCCGGC TGGTCTATAC CCAGATCTGG
GAAGATCCCG AGGCGGATCT CGCTGCGCTG CAACTGCCGA TCGGCTCGAC GATCGTTACG
ATTTCCTCCG GTGGCTGCAA CGCGCTGTCG TACCTTACCG CCAAACCCGC ACAGGTGTTT
GCGGTCGACC TCAACGAAGC GCATCTCGCT CTGCTGAAGC TGAAGCTCGC CGGGCTGCGG
GCCTTGCCCG ACTACGAGCA GTTCTGGCGC TTCTTCGGCG AAGGCATGGC CGACGACAAT
TCCGACCTGT ATCGGCAGCG ACTGCGGCCG CAGCTCGACG GCGACGCGCG CAGCTATTGG
GACGAGCGCG ACTTCCGCGG CCGTCCGCGC TACCGCTACT TCACCAACGG CTTCTATCGT
CACGGCGCGC TGGGCAGCTT CATCGGCTTT GCGCATCTGC TGGCGAAGAT CGCGAAGATC
GACCTGTCGG CGCTGCTCGA GGCGGCGCCG GAGTCGCCGG AGCGCCAGGC CGCGCTGCAG
CGCCTCGATC GATTATTCCA CTCGCGCTTC GCCAAGCTGC TGACGCGCAC CCCCGCGCTG
CTGTTCAGCC TCGGCATTCC GCCGCAGCAG CGCGATCTGC TCGGCGGCGA CCAGCCGCTC
AACGAGGTGC TGCACGCACG GCTGCTGCGA CTGATCAACG GCTACCCGAA TGAGACGAAC
TACTTTGCCT GGCAGGCGTT GAGCCGACGC TATCCCGGAC CCGGCGACGA TTGCCTGCCG
CTGTATCTGC AGCGCAGCCG CTACGCGCAG ATGCGCTCCG GCGCCGGACT GATCATTCCG
GTGCACGAGA ATTTGCGGGT GTTCCTGGAA AGCCTGCCGG CCCGGCAGAT CGACGCGTTG
GTGCTGCTGG ATTCGCAGGA CTGGATGGCC GCCGATGAAG TTCGGGCGTT GTGGGACGCG
ATCGATCGCG CCGGCAAGGA TTCGGTGCAG GTGATCTTCC GCACCGCGGG CGCCGAATCG
CCGCTCGAGA CCGATGCGCT CGCGCCGCTG CAGCAGGTGT GGCAGCGCGA CGAGGATCGC
AGCGCGATCG GCTTCGCGCG CGATCGTTCG GGCATCTATG GCGGCTTCCA TTGCTACGCG
CGGCGGGCGG GCGGCGGACG CTGA
 
Protein sequence
MNTQQLIADA VRNSKDRSES TIWDRLFSIW FRRLVYTQIW EDPEADLAAL QLPIGSTIVT 
ISSGGCNALS YLTAKPAQVF AVDLNEAHLA LLKLKLAGLR ALPDYEQFWR FFGEGMADDN
SDLYRQRLRP QLDGDARSYW DERDFRGRPR YRYFTNGFYR HGALGSFIGF AHLLAKIAKI
DLSALLEAAP ESPERQAALQ RLDRLFHSRF AKLLTRTPAL LFSLGIPPQQ RDLLGGDQPL
NEVLHARLLR LINGYPNETN YFAWQALSRR YPGPGDDCLP LYLQRSRYAQ MRSGAGLIIP
VHENLRVFLE SLPARQIDAL VLLDSQDWMA ADEVRALWDA IDRAGKDSVQ VIFRTAGAES
PLETDALAPL QQVWQRDEDR SAIGFARDRS GIYGGFHCYA RRAGGGR