| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0619 |
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| Symbol | |
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| ID | 4021088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 701286 |
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| End bp | 702539 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637960807 |
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| Product | putative L-sorbosone dehydrogenase |
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| Protein accession | YP_567758 |
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| Protein GI | 91975099 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCGA TCTTCAGACG ATCCGTTGTT GCATGCGCTG CAGTCCTGGC GATCGGGGCT
CTCGATCAAG CTGTCGCTCA GGGCCTCAAG AAATACGATT CCGACAAGAA GGACTTCTGG
ACCAACCCGC CGCCGGATTG GTTCCTCGGC GACGAGACCG AGGCGCAGAA GGGTCTCGCG
CCGCCGGCCG GCCCGCCGAC CGGATCGTCC GATGCCGAAC TCGCCGCGAT GATGAAGAAG
ATCAAGCTGC CGCCGGGCTT CAAGATCGAA GTCTACGCCT CGGGCGTGCT GGCGGCGCGG
CAAATGGCCT GGGGCGACAA CGGCACGCTG TTCGTCGGCT CGTTCGGCCT CGGCAACGTC
TATGCGATCA CCGAGAAGGA CGCCAAGAAA CAGGTCAAGA CCGTCCTCAA GGGCATGAAG
ATGCCGACCG GCATCGCATT CCAGAACGGC GCGCTCTACG TGATCGATAT CGACAAGCTG
ATCCGCTACG ACAACGCCGA AGCCAATCTC GACAAGCTCG GCGACGGCAA GGTCGTCTAT
GACGACATGC CGTCTTACGT CGCGCACGGA TGGAAGTATC TCGCGGCGGA CAAGGACGGC
TGGTTCTACG TGCCGTTCGG CCCGCCCTTC AACATCGGCC TGCCGCCGAC CTCGCTGTCG
CAGATCCGCC GCATCGATCC CAAGACCGGC AACGCCGAAT TGGTCGCGCT CGGCGTGCGC
AATTCGGTCG GCGGCGACGT CGATCCGCGC ACCGGCAAAT ACTGGTTCAC CGAAAACGCC
CGCGACTGGA TCAGCGACGA CATGCCGAGC GACAAGCTCA ACATGATCTC GAAGCTCGGC
GAGCATTTCG GCTATCCGTA TTGCCATCAG GGCGACATGC CGGACCCGAA ATTCGCGATG
GGGCACAAAT GCTCCGAGTT CACGCCGCCG GTGCTGAACC TCGGCGCGCA TGTCGCTCCG
CTCGGCATGA AGTTCTACAC CGGCGACCAG TTCCCCGCCG AGTACAAGAA CAACATCTTC
ATCGCCGAGC ACGGCTCCTG GAATCGTCAC AAGTATCAGG GCGCGCTGAT CAAGCGCGTG
ATCGTCGATC CGGACGGCAA GAACGCCAAG CAGGAAAACT TCGCCACCGG GTGGATCGAG
GGCGACCAGG GCTATCTCGG CAGACCCGCC GACATCGTGC TGGCCAAAGA CGGTTCGATG
CTGGTGGCGG ACGATTGGGC CGGCGCGATC TATCGCATCA GCTACAGCAA GTGA
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| Protein sequence | MKSIFRRSVV ACAAVLAIGA LDQAVAQGLK KYDSDKKDFW TNPPPDWFLG DETEAQKGLA
PPAGPPTGSS DAELAAMMKK IKLPPGFKIE VYASGVLAAR QMAWGDNGTL FVGSFGLGNV
YAITEKDAKK QVKTVLKGMK MPTGIAFQNG ALYVIDIDKL IRYDNAEANL DKLGDGKVVY
DDMPSYVAHG WKYLAADKDG WFYVPFGPPF NIGLPPTSLS QIRRIDPKTG NAELVALGVR
NSVGGDVDPR TGKYWFTENA RDWISDDMPS DKLNMISKLG EHFGYPYCHQ GDMPDPKFAM
GHKCSEFTPP VLNLGAHVAP LGMKFYTGDQ FPAEYKNNIF IAEHGSWNRH KYQGALIKRV
IVDPDGKNAK QENFATGWIE GDQGYLGRPA DIVLAKDGSM LVADDWAGAI YRISYSK
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