Gene RPD_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0613 
Symbol 
ID4021082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp693181 
End bp694428 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content69% 
IMG OID637960801 
Productacetyl-CoA hydrolase/transferase 
Protein accessionYP_567752 
Protein GI91975093 
COG category[C] Energy production and conversion 
COG ID[COG0427] Acetyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.599224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTAG CGACCTCAGC GATCGACTTC GCCGGCCTGA TCCGGGCGGG CGACCTCGTG 
GTCTGCGGGC AGGCGACCGC GGAACCGCGG ACGCTGACCG AAGCGCTGGC CGAACAATCG
TTCGGCCTGC CGCCGTTCCG CCTGATGGTC GGGCCGTTGT TCTCGGACAC GTTTTCCCGC
ACGGATACTT CGAACATTTC GTTCCTGAGC TACGGCGTGA TCGGCCACGC GCGCAAGCTC
GCGCGCGCCG GCCGGCTCGA CGTGGTGCCG AGCAATTACT CCGCGTTCTG CGCCGACTTC
GCGTCGGGGC GACATCGTGC CGACGTCGTG CTGGTGCAGC TCGCTGTGTC GGCTGACGGC
CGCCTGAGCG CGAGCCTGTC CAGGGACTAC GTCATCGATG CGGCGCGGCG GGCGCGACTG
GTGATCGCCG AGATCAATCC CGATGCGCCC TTCACCTGCG GCGCCGAGTG GCCGGACGAT
GTCCCGATCC ATCTCCGCAT CGCCGCGCGC CATCCGCCGC TTGAATTGCC GTCGGATGCG
CCGGACGAGG TCTCGCGCCG GATCGCGGCG AATGCCGCCG CGCTGATTGC CGACGGCAGC
ACGCTGCAAT TCGGCGTCGG CAAGATCCCG GATGCGATCC TGTCGTCGCT GACCCACGCG
CGGCATCTCG GCATCCACTC CGGACTGATC AACGACGCCG TGGTCGATCT GATCGCGCGC
GGCGTCGTCA CCAATGCCTG CAAGGGAATC GATCCGGGCG TCACGGTGAC CAATCAGTTG
ATCGGCACGC AGCGGCTGTA TTGCTTCGCG GATCGCAACA AAGCGGTGGC GATGCATCCG
GCGTCCTACA CCCATGATCA CGGCGTGCTG TCCCGGATCA ACCGGCTGGT CGCGATCAAT
TCGGCGCTGC AGGTCGGCGT CGACGGCAGT GTCAACGCCG AGACCCTCAA CGGCGTCGCG
ATCGGCGCGA TCGGCGGCCA GCTCGATTTC GTCCGCGGCG CCAACGCCTC GCCGGGCGGG
CGGGCGATCA TCGCGCTGCC GGCGGCGGCG CCCGACGGCA GCAGCCGCAT CGTCGCATCG
GTCGAGACCG TGACGACGCC GCGCGCCGAC GTCGACGCCA TCGTCACCGA ATGGGGCGTC
GCCGAGCTGC GCGGCTGCAG CCTGAGCGAA CGCGCGCGCC GGATGATCGC AATCGCAGCG
CCGCAGCATC GCGACCGGCT CACGCACCAA TCGAAGCCGA TGACATGA
 
Protein sequence
MPVATSAIDF AGLIRAGDLV VCGQATAEPR TLTEALAEQS FGLPPFRLMV GPLFSDTFSR 
TDTSNISFLS YGVIGHARKL ARAGRLDVVP SNYSAFCADF ASGRHRADVV LVQLAVSADG
RLSASLSRDY VIDAARRARL VIAEINPDAP FTCGAEWPDD VPIHLRIAAR HPPLELPSDA
PDEVSRRIAA NAAALIADGS TLQFGVGKIP DAILSSLTHA RHLGIHSGLI NDAVVDLIAR
GVVTNACKGI DPGVTVTNQL IGTQRLYCFA DRNKAVAMHP ASYTHDHGVL SRINRLVAIN
SALQVGVDGS VNAETLNGVA IGAIGGQLDF VRGANASPGG RAIIALPAAA PDGSSRIVAS
VETVTTPRAD VDAIVTEWGV AELRGCSLSE RARRMIAIAA PQHRDRLTHQ SKPMT