| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0609 |
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| Symbol | |
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| ID | 4021078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 689010 |
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| End bp | 690035 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637960797 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_567748 |
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| Protein GI | 91975089 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.691763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAGAA CCCTGGGTCT GTCAGTGGCT GTGTCGCTGT CAGTCACGAT GGCGCTGACG
TCAGCGCAGG CGCTCGAGTT GAAGGTCGCC GATTCGTTTC CGGCCGGGCA CTATCTGGTG
CGGCTGATGC TGAAGCCCTG GATGGACGAC GTCACCAAGC GGACCAACGG CGCGGTCACC
TTCAGCTATT ATCCCAATCA GCAGATGGGC AAGGCCACGG ATCTGCTGCG TCTTACCCAG
TCGGGTGTCG TCGATATCGG CTACATCGCG CCGTCCTATG CGTCCGACAA GATGCCGCTG
TCGGAAGTGG CGCAGCTCCC GGAATCGTTC TCGACGAGCT GCCAGGGCAC GCTCGCCTAT
TGGAAAAGCG CCCGGGAGGG TGTGCTCGCC CAGAAGGAAT ACGCGCCGAA CAAGATCAAG
CTGCTGATGG CCGTGGTGCT GCCGCCCTAT CAGGTGTTCA CGGTGAAGAA CAAGATCGAA
TCCATCAGCG ACATTCAGGG CCTGAAGCTG CGGACCACCG GCGGCGCGCA GGACTTGACG
CTGCGCGCGC TCGGCGCGGT GCCGGTCCGG ATGTCGGCGC CGGACGCCTA TGAATCGCTG
GCGCGCGGCA CGATGGACGG CGTGCTGTTT CCAGCCGACA GCATTCCCTC CTACGGGCTC
GACAAGCTGG TGAAGCACGC CACCGACGGC GTCAGCTTCG GGTCGTTCAT TGTGGCTTAT
TCGATCAGCC AGGCGGCGTG GAACAAGCTG CCGGCCGACG TCAAGGCCGC GATGGACGAG
GCCTCCGAAG CGATCGAGCC GAAGGTCTGC GCCGACGTCG ACAAGGAGCA GGCGCAGACC
CGAAAGCAAT TGAACGACGC CGGGGTCGCC TACGATCCGA TTCCGGACGC GACCAAAGCT
CAGATGAAAG ACAGGCTGAA GGGCGTCAGC GTGGAGTGGG CGGCCGCGAT CGACGCGCGC
GGCAAGCCGG CGTCCGAAGC GCTCAAGGAG TTCGAGAGTC TGCTGGCCGC GAGCGCGAAC
AAGTAA
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| Protein sequence | MRRTLGLSVA VSLSVTMALT SAQALELKVA DSFPAGHYLV RLMLKPWMDD VTKRTNGAVT
FSYYPNQQMG KATDLLRLTQ SGVVDIGYIA PSYASDKMPL SEVAQLPESF STSCQGTLAY
WKSAREGVLA QKEYAPNKIK LLMAVVLPPY QVFTVKNKIE SISDIQGLKL RTTGGAQDLT
LRALGAVPVR MSAPDAYESL ARGTMDGVLF PADSIPSYGL DKLVKHATDG VSFGSFIVAY
SISQAAWNKL PADVKAAMDE ASEAIEPKVC ADVDKEQAQT RKQLNDAGVA YDPIPDATKA
QMKDRLKGVS VEWAAAIDAR GKPASEALKE FESLLAASAN K
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