Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0606 |
Symbol | |
ID | 4021075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 686274 |
End bp | 687122 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637960794 |
Product | Citryl-CoA lyase |
Protein accession | YP_567745 |
Protein GI | 91975086 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTCGA TGCTGTTCGT GCCGGGCGAC AGCCCGCGCA AATTCGAAAA GGCGTCGCAA GGCGCTGCCG ACGCCCTGAT CATCGATCTG GAGGACTCGG TCGTCACCGA CCGGAAGGAC GACGCGCGCG GGATGACGCG GACCATGCTG CACGCGCCGC GCGGCAAGCC GCAGCTCTAC GTCCGCGTCA ACGCGCTGGA CACCGGCCGC ACGCTCGGCG ACCTCGCCGC GGTGATGCCG GCGCGGCCTG ACGGCATCGT GCTGCCGAAA TCGCGCGGCG GCGAAGATGT CCGGATGGTG GCGCTGTGGC TCGACGCCTT CGAGGCGGCG GCGGGTCTCA CGCCGGGATC GACCCGCATC GTCGTGGTCG CCACCGAGAC CGCCGGCTCG ATCTTCGGGC TCGGCAGCTA CAAGGATTGT TCGCCGCGGC TCGCCGGGCT GATGTGGGGC GCGGAAGACC TCGCGGCGTC GCTCGGCGCG ACCGAGAACG GCAGCGGCGG CGTGTTTCAT AGTCCGTACC GGCTGGCGCG CGATCTGTGC CTGATGGGCG CCGCGGCGGC CGAGGTCACC GCTATCGATA CGGTCTATAC CGACATCGAC AACCTCGCCG GGCTGGAGCA GGAAACCCGC GCGGCGCGGC GCGACGGTTT CACCTGCAAG GCGCTGATCC ACCCCAAGCA CGTCGACATC GTCAACGCCG CCTTCGCGCC GACCGCGGCT GAGCGCGGCT GGGCCGAGAA GGTCGTGGCG GCGTTTGCGG AGAATCCGGA CGCCGGCACA TTGCGCCTCG ACGGAAAGAT GCTTGACAAG CCGCATCTGA GAGCGGCGCA GAGGATCCTC GGAACATGA
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Protein sequence | MRSMLFVPGD SPRKFEKASQ GAADALIIDL EDSVVTDRKD DARGMTRTML HAPRGKPQLY VRVNALDTGR TLGDLAAVMP ARPDGIVLPK SRGGEDVRMV ALWLDAFEAA AGLTPGSTRI VVVATETAGS IFGLGSYKDC SPRLAGLMWG AEDLAASLGA TENGSGGVFH SPYRLARDLC LMGAAAAEVT AIDTVYTDID NLAGLEQETR AARRDGFTCK ALIHPKHVDI VNAAFAPTAA ERGWAEKVVA AFAENPDAGT LRLDGKMLDK PHLRAAQRIL GT
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