Gene RPD_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0606 
Symbol 
ID4021075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp686274 
End bp687122 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content69% 
IMG OID637960794 
ProductCitryl-CoA lyase 
Protein accessionYP_567745 
Protein GI91975086 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCGA TGCTGTTCGT GCCGGGCGAC AGCCCGCGCA AATTCGAAAA GGCGTCGCAA 
GGCGCTGCCG ACGCCCTGAT CATCGATCTG GAGGACTCGG TCGTCACCGA CCGGAAGGAC
GACGCGCGCG GGATGACGCG GACCATGCTG CACGCGCCGC GCGGCAAGCC GCAGCTCTAC
GTCCGCGTCA ACGCGCTGGA CACCGGCCGC ACGCTCGGCG ACCTCGCCGC GGTGATGCCG
GCGCGGCCTG ACGGCATCGT GCTGCCGAAA TCGCGCGGCG GCGAAGATGT CCGGATGGTG
GCGCTGTGGC TCGACGCCTT CGAGGCGGCG GCGGGTCTCA CGCCGGGATC GACCCGCATC
GTCGTGGTCG CCACCGAGAC CGCCGGCTCG ATCTTCGGGC TCGGCAGCTA CAAGGATTGT
TCGCCGCGGC TCGCCGGGCT GATGTGGGGC GCGGAAGACC TCGCGGCGTC GCTCGGCGCG
ACCGAGAACG GCAGCGGCGG CGTGTTTCAT AGTCCGTACC GGCTGGCGCG CGATCTGTGC
CTGATGGGCG CCGCGGCGGC CGAGGTCACC GCTATCGATA CGGTCTATAC CGACATCGAC
AACCTCGCCG GGCTGGAGCA GGAAACCCGC GCGGCGCGGC GCGACGGTTT CACCTGCAAG
GCGCTGATCC ACCCCAAGCA CGTCGACATC GTCAACGCCG CCTTCGCGCC GACCGCGGCT
GAGCGCGGCT GGGCCGAGAA GGTCGTGGCG GCGTTTGCGG AGAATCCGGA CGCCGGCACA
TTGCGCCTCG ACGGAAAGAT GCTTGACAAG CCGCATCTGA GAGCGGCGCA GAGGATCCTC
GGAACATGA
 
Protein sequence
MRSMLFVPGD SPRKFEKASQ GAADALIIDL EDSVVTDRKD DARGMTRTML HAPRGKPQLY 
VRVNALDTGR TLGDLAAVMP ARPDGIVLPK SRGGEDVRMV ALWLDAFEAA AGLTPGSTRI
VVVATETAGS IFGLGSYKDC SPRLAGLMWG AEDLAASLGA TENGSGGVFH SPYRLARDLC
LMGAAAAEVT AIDTVYTDID NLAGLEQETR AARRDGFTCK ALIHPKHVDI VNAAFAPTAA
ERGWAEKVVA AFAENPDAGT LRLDGKMLDK PHLRAAQRIL GT