Gene RPD_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0604 
Symbol 
ID4021073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp684420 
End bp685463 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content63% 
IMG OID637960792 
Productguanosine 5'-monophosphate oxidoreductase 
Protein accessionYP_567743 
Protein GI91975084 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0516] IMP dehydrogenase/GMP reductase 
TIGRFAM ID[TIGR01305] guanosine monophosphate reductase, eukaryotic 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATATCG ATTTGAACCC GAAACTGGAT TTTCGCGATG TTCTGATCCG GCCGAAACGG 
TCGGTGCTGG CGTCGCGGTT CGAAGCCAAT ATCAGCCGCA CGTTCGGCTT CCGTCACTCC
AGCCGGGAAT GGACCGGCTT TCCGCTGATC GCGTCCAATA TGGATACGAT CGGGACGCTC
GAGATGGCCG ATGCGTTCCG GCCGTTCGGC GCGCTGGTCG CGCTACACAA ATTCTACGAT
CCGGAACGGC TGGCGAAGTA CCTCGATGAT CATGCCAATC CCAACGTGTT TCTCACCGTC
GGCACCGGCG CCAGTGATTG GGATCGCCTC GCCGCGGTCA AGAAGCAGAC CAAGGTGCCG
GTGCTGAACA TCGACGTCGC CAACGGCTAC ACCGAGAATT TCGTGCGCGC GGTATCGAAG
CTGCGCGAGG AGAATCCCGA CGCGATCATC ATGGCCGGCA CGGTGGTGAC GGCGGAGATG
ACCGAGGCGC TGGTGATCGC CGGCGCCGAT ATCGTTCGTG TCGGAATCGG CTCGGGCTCG
GTCTGCACCA CGCGCGACCT GACCGGCGTC GGTTATCCGC AACTCTCGGC GGTGATCGAA
TGCGCCGACG CTGCGCACGG GCTGAAAGGT CACGTCTGCT CGGATGGCGG CTGCACCGTT
CCGGGGGATG TCGCCAAGGC CTATGGCGGC GGCGCGGATT TCGTCATGCT CGGCGGGATG
CTCGCCGGTC ACGTCGAATG CGGCGGCGAG CTGCGATATC TCGAGGAGGG CGGCAAGCGG
GTGCCGAAGA GCATGGTATT CTACGGCATG TCGTCGGAGA CGGCGATGAA CAAGTACCAC
GGTGGCGTCG CCGACTATCG TGCGGCGGAA GGCAAGACCG TCGAGGTGCC GTATCGCGGC
GAGGTGCGGG CGACCGTCGA GACAATCGCG GGCGGGCTGC GGTCCGCCAT GACTTACATG
GGTGCGGAAA ACCTCAAGGA AATCCCGAAG CGGACCACCT TCATTCTGGT CAACGCCCAG
CGCAACACGG TGTTCGATCG CTAG
 
Protein sequence
MHIDLNPKLD FRDVLIRPKR SVLASRFEAN ISRTFGFRHS SREWTGFPLI ASNMDTIGTL 
EMADAFRPFG ALVALHKFYD PERLAKYLDD HANPNVFLTV GTGASDWDRL AAVKKQTKVP
VLNIDVANGY TENFVRAVSK LREENPDAII MAGTVVTAEM TEALVIAGAD IVRVGIGSGS
VCTTRDLTGV GYPQLSAVIE CADAAHGLKG HVCSDGGCTV PGDVAKAYGG GADFVMLGGM
LAGHVECGGE LRYLEEGGKR VPKSMVFYGM SSETAMNKYH GGVADYRAAE GKTVEVPYRG
EVRATVETIA GGLRSAMTYM GAENLKEIPK RTTFILVNAQ RNTVFDR