Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0599 |
Symbol | |
ID | 4021068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 677051 |
End bp | 677887 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637960787 |
Product | Surfeit locus 1 |
Protein accession | YP_567738 |
Protein GI | 91975079 |
COG category | [S] Function unknown |
COG ID | [COG3346] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCCCCG ACAGCGATCC GGCGAACGGC GCCCGCCCAT CGGCGCGCCG GCCCTCGCTA TGGCTTACGA TCCCGGCCGT CGCCGGCGTG TTCGGATTGA TCGCGCTCGG CATCTGGCAG ATCGAAAGGC GGGCCTGGAA ACTGGCGCTG ATCGATCGGG TCGAGCAGCG CGCTGATGCC GTGCCCGTGC CGCTGCCTCC AGCCGCATCC TGGCCCGAGG TGACTGCAGC CCGCGACGAA TACCGGCGCG TGACGGCCAG CGGCCGATTC CTGCATGATC GCGAGACGCT GGTGAAGGCC GTCACCGACG CCGGCGGCGG CTCTTGGGTG ATCACGCCGC TGCGAACCGG GGACGGCGCC ACGGTGCTGA TCAATCGCGG TTTCGTTCCG CCGAACCAGC GCGATCGTGC GACCCGCAGC GCGCGTGAGC CTGCGGGAGA GATCGCGATC ACCGGCCTGT TGCGCGTGAC GGAGCCAGGC GGCGGCTTTC TTCGGCACAA TGATCCGGCC GGCGATCGCT GGTACTCGCG CGACGTCGCC GCCATCGCGG CCGCGCGCAG CGTCGAAAGT GTCGCACCCT TTTTCATTGA TGCGGATGCT TCGCTCAATG CGCCCGGGCA GCCGATCGGC GGCCTGACGG TGGTGCGGTT CCCCAATAAC CACCTGGTCT ATGCGCTCAC GTGGTTTTGC CTGGCTTTTA TGCTGTTCGG CTGGCTTGCT GTTGCCTTCG GGAGCGGATT TTTCCGGCGT GCACGCGCCG GCCGCGGACC GGGTCAAGAG GTGCGTTCCG CCCTCCCAAC GGGATCACAT GCTGGACCGA TCGCCGAGCA TCGCTGA
|
Protein sequence | MTPDSDPANG ARPSARRPSL WLTIPAVAGV FGLIALGIWQ IERRAWKLAL IDRVEQRADA VPVPLPPAAS WPEVTAARDE YRRVTASGRF LHDRETLVKA VTDAGGGSWV ITPLRTGDGA TVLINRGFVP PNQRDRATRS AREPAGEIAI TGLLRVTEPG GGFLRHNDPA GDRWYSRDVA AIAAARSVES VAPFFIDADA SLNAPGQPIG GLTVVRFPNN HLVYALTWFC LAFMLFGWLA VAFGSGFFRR ARAGRGPGQE VRSALPTGSH AGPIAEHR
|
| |