Gene RPD_0598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0598 
Symbol 
ID4021067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp676641 
End bp677033 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content62% 
IMG OID637960786 
Productcytochrome C oxidase subunit IV 
Protein accessionYP_567737 
Protein GI91975078 
COG category[C] Energy production and conversion 
COG ID[COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 
TIGRFAM ID[TIGR02847] cytochrome o ubiquinol oxidase subunit IV 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCA ATTCTCCCCC CGTCGACGCG CACGGCCACG ACCACGGCCA TGAAGCCCAC 
GTGGCTGCCC ACAATCATGG GACGCTGAAG AGCTACCTGA TCGGCTTCGG ATTGTCGGTG
GTGCTCACCG CCATCCCGTT CTGGCTGGTG ATGGGCGACG TGCTCGGCAA CAAGCAGGCG
ACCGGGCTGG TGATCATGGC GTTCGCGGCA GTGCAGATCG TCGTGCACAT GATCTATTTC
CTGCACATGA CCACCGCGGC CGAAGAAGGC TGGACGATGA TGGCGCTGAT CTTCACCATC
GTCATGGTGG TGATCGCGCT GGCGGGCTCG CTGTGGGTGA TGCACCATCT CACCACCAAC
ATGATGCCGG CCCACGACAT GATCCGGCGG TGA
 
Protein sequence
MTLNSPPVDA HGHDHGHEAH VAAHNHGTLK SYLIGFGLSV VLTAIPFWLV MGDVLGNKQA 
TGLVIMAFAA VQIVVHMIYF LHMTTAAEEG WTMMALIFTI VMVVIALAGS LWVMHHLTTN
MMPAHDMIRR