| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0596 |
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| Symbol | |
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| ID | 4021065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 674009 |
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| End bp | 676018 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637960784 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_567735 |
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| Protein GI | 91975076 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.180584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACCA ATCCTGATAT CGTCAAAGCG ATCTTCGGCC GGCTGTCGCT GGAGTCGCTG
CCGTTGCACG AACCGATCGT GGTGCTCGCC TTCATCGGCA CCGCACTCGG CGGCGCCGCC
GTCGCTGCGG GCATCACCTA TTTCAAGCTG TGGGGCTATC TGTGGCGCGA GTGGTTCACC
ACCGTCGACC ACAAGCGCAT CGGCATCATG TACATGATCC TCGGCATCGT CATGCTGCTG
CGCGGCTTCG CCGACGCGAT CATGATGCGT ATCCAGCAGG CGATGGCGTT CAACGGCTCC
GAGGGCTATC TCAACGCCCA TCACTACGAC CAGATCTTCA CCGCCCACGG CGTGATCATG
ATCTTCTTCG TGGCGATGCC GATGGTCACC GGCCTGATGA ACTACGTCGT GCCGCTGCAG
ATCGGCGCGC GCGACGTGTC GTTCCCGTTC CTCAACAATT TCAGCTTCTG GATGACCACG
GCCGGCGCTG TGCTGGTGAT GATCTCGCTG TTCGTCGGCG AATTCGCGCG CACCGGCTGG
CTCGCTTATC CGCCGCTGTC GAACATCGGC TACAGTCCGG ACGTCGGCGT CGACTATTAC
ATATGGTCGC TGCAGGTCGC CGGCGTCGGG ACGCTGCTGT CCGGCGTCAA CCTGATCTGC
ACCATCGTCA AGCTGCGGGC GCCCGGCATG ACGATGATGC GGATGCCGAT CTTCACCTGG
ACGTCGCTCT GCACCAACAT CCTGATCGTC GCCTCGTTTC CGGTGCTGAC AGCGGTGCTG
GCGCTGCTGA CGCTCGATCG TTATGTCGGC ACCAACTTCT TCACGAACGA CTTCGGCGGC
AACCCGATGA TGTACGTGAA CCTGATCTGG ATCTGGGGCC ATCCGGAGGT CTACATCCTG
ATCCTGCCGG CGTTCGGCAT CTTCTCCGAA GTGGCCGCGA CGTTCTCTGG CAAGCGGCTG
TTCGGCTACA CCTCGATGGT CTACGCCACG GTCGTCATCA CCATCCTGTC GTATCTGGTC
TGGCTGCATC ACTTCTTCAC GATGGGGTCG GGCGCCAGCG TCAACTCGTT CTTCGGTATC
ACCACGATGA TCATCTCGAT CCCGACGGGC GCGAAGATGT TCAACTGGCT GTTCACGATG
TATCGCGGCC GCATCCGCTA CGATCTGCCG ATGATGTGGA CGGTCGCGTT CATGCTGACC
TTCGTGATCG GCGGCATGAC CGGCGTGCTG CTCGCGGTGC CGCCGGCCGA TTTCGTGCTG
CACAACAGCC TGTTCCTGGT CGCGCATTTC CACAACGTGA TCATCGGCGG GGTGGTGTTC
GGCGCGTTCG CCGGCATCGC CTACTGGTTC CCGAAGGCGT TCGGCTTCAA GCTCGACGTG
TTCTGGGGCA AGGTCTCGTT CTGGTGCTGG GTGGTCGGGT TCTACTTCGC GTTCATGCCG
CTCTACGTCC TCGGCCTGAT GGGCGTCACC CGACGGCTGA GGGTGTTCGA CGATCCTAGC
TATCAGATCT GGTTCGCCAT CGCGGCATTC GGGGCGTTCC TGGTCCTGAT TGGAATTGTC
GCCTTCCTGA TCCAGATCGC GGTCAGCGTC ATGCGCCGCG AGCAGCTCCG CGACGTCACC
GGTGATCCGT GGAACGGGCG CACGCTGGAA TGGGCGACGT CGTCGCCGCC GCCCGACTAC
AACTTCGCCT TCACGCCGAT GGTGCGCGAC GCCGACGCGT GGTGGGACAT GAAGAAACAC
GGCTACAGCC GTCCGCTCGG CGGATTCAAG CCGATTCACA TGCCGAGCAA CACCGGGACC
GGCGTCATTC TCGCCGGGCT CAGCACGGTG ATGTCGTTCG GGCTGATCTG GTACATCTGG
TGGCTGGCGG CGCTGTCGTT CATCGCGCTG CTCGCCGTCG CGATCGGGCA CACCTTCAAC
TATCACCGCG ACTACCACAT CCCTGCCGAC GAGGTCGTTC GCGTCGAAGA CGAGCGAACC
CGTCTGCTCG CCGCGGGAGC CCGGCCATGA
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| Protein sequence | MFTNPDIVKA IFGRLSLESL PLHEPIVVLA FIGTALGGAA VAAGITYFKL WGYLWREWFT
TVDHKRIGIM YMILGIVMLL RGFADAIMMR IQQAMAFNGS EGYLNAHHYD QIFTAHGVIM
IFFVAMPMVT GLMNYVVPLQ IGARDVSFPF LNNFSFWMTT AGAVLVMISL FVGEFARTGW
LAYPPLSNIG YSPDVGVDYY IWSLQVAGVG TLLSGVNLIC TIVKLRAPGM TMMRMPIFTW
TSLCTNILIV ASFPVLTAVL ALLTLDRYVG TNFFTNDFGG NPMMYVNLIW IWGHPEVYIL
ILPAFGIFSE VAATFSGKRL FGYTSMVYAT VVITILSYLV WLHHFFTMGS GASVNSFFGI
TTMIISIPTG AKMFNWLFTM YRGRIRYDLP MMWTVAFMLT FVIGGMTGVL LAVPPADFVL
HNSLFLVAHF HNVIIGGVVF GAFAGIAYWF PKAFGFKLDV FWGKVSFWCW VVGFYFAFMP
LYVLGLMGVT RRLRVFDDPS YQIWFAIAAF GAFLVLIGIV AFLIQIAVSV MRREQLRDVT
GDPWNGRTLE WATSSPPPDY NFAFTPMVRD ADAWWDMKKH GYSRPLGGFK PIHMPSNTGT
GVILAGLSTV MSFGLIWYIW WLAALSFIAL LAVAIGHTFN YHRDYHIPAD EVVRVEDERT
RLLAAGARP
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