| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0591 |
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| Symbol | |
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| ID | 4021060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 664209 |
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| End bp | 669098 |
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| Gene Length | 4890 bp |
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| Protein Length | 1629 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637960779 |
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| Product | DNA helicase, putative |
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| Protein accession | YP_567730 |
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| Protein GI | 91975071 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGGGAG TAGAGGAACG CCGAGGGGGG GCCGACGAAA CGCCCGCATT GCGCCTCTCG
GAATTGCTCG ACTACGTCGA GCAGGTGATC AAGCTGGACG AGCGGCCGAC GTTCAGACTC
TCCGAGTATC GCCTCGCCAA TGGCCAGACC TTCACGTTCC ACGAACATGA ATTTCATGCA
CTCCCGGGCA TCACGCACGA TCTGACCGAC GACGACGGCG CAATTTGGCT GAGCATAGAG
CGCCTCAAAC GGAACGATCC ACCTACGCCT CCCGATCGTT CGGTGCCTTG GATCGAGCTT
TCACCGGATC CCGAAAAGAC GCCAATTACA CGCGGCCACG TGCTGATCAC CGTGCCCAAA
GCCGAATGCG ATGCATTCGT GGCCTCGGGG CGGGCCCGCG CGGAGGATTG CGCCGAGTCT
TTAGCGGTCG GCGCGAAAGG TCAGTTCGAC ATCCGGTTGC GGCTGGAAGA TTGGCCGGAG
ATCGCAACGG AGATCGAGGA TTACATCTCG CAATCTTGGT TGCCGTGGTC CGTCGCAGAG
CGGCCGCGGA GGCGGTCGAT CGCTCTCTAT CAAAAGCTTT TCGAGGTTGC TCAGATCTCC
GAGATGGGGG GCGCGGAACA AGCGATCGAG TTGGTCTGGG GGATCGGTCT TTCGCGCTGG
ATGTTCGAAG GGACGTTGAT CGACCTCCCG CTGATCGAGC GATTGGTAGA GATCGAGATC
GACGAAAGCG CGGCGGGCAC CATCAGGGTG CGCCCAAGGC AGGCGCCAGC GACCGTGAAC
CTGCGGCCCT ACGACGAACT CAAGATTGAC GGCGTCCCCA TGGCGCAGGA TGCCGCCCGG
CGGGCGCTTT CGGCAGTCGA CGAGGAGTCG GGCGTAAGCC CGTTCGAGCG CGACACCTTC
GAACTGGTTC TGCGGGCGTG CCAGACGCAA CTGGATCCGG GGGGCGTCTA CCTTCCCGAC
AGCGAGCGCA TCGAGCCCAC AGTGCCGCCG CCTCCGGCGT CAGAAAACCT GGTCGTCACC
GACCGCTGGG TCGTGGCGGC GCGGAAGCGA TCCGACAACT TCCTTCTCCA GGACATTGCG
AACCTCAAGC ACGCAATAGA ACTTTCGCCC GCCGACCTTC CCGGACCATC ACGCACTTTG
GTGATGGGTC CGGCGCCGTC CAGGTCCAAT CGCTGGGGCG CGCTGCCGGG CTCGTTGGGA
GGCGCATCCG AATCAACGGT CGCAGACGAG CCCAGCGCGC CGCTCGGCGA CCTCTTCTTT
CCCAAACCTT TCAACGACGA ACAGGTCGAG ATCGTCAGAA GGCTGGAGGA GAACGATGGC
GTCGTAGTGC AGGGGCCGCC CGGTACTGGC AAGACGCACA CGATATCGAA CATCATCTGC
CACTATCTGG CGCTCGGTCG CCGCGTGCTC GTCGTTTCGC ACGGCGAGCC CGCGCTGTCG
GTGCTGCGCG ATCAGTTGCC GCCGGAAGTG CGTGATCTGG CGATCAGCAT CACGACGTCG
GAAAAGGAAG GCTTCAAGCA GCTCGAAGGA GCCGTCCGCC TGCTCCAATC GATCATCGAG
AGCATTCGTC CGGGCGAACA ACACCGACTG ATCCGAAATC TGGAGAATTC GATCATTGGG
ATGCGTGGGC GGATTGCCGA GATCGACGCG GAGATCGGCA GGCTCGCGGA GAAACAGCTT
TCTGCCGTTC CTGGCAGCGA TCTGCGGCCA GCCGAACTGG CGGCCGCGGT CGTCGCGAGC
GGCGACAAGT ATTCATGGTT CGTTGACCGA CCGGCCGCAT TTGCGGCGGA TGCGACCTTC
GATGATGGCG ACTTCGAGCG GATCCGTGAA GCCAGGCTCG CGCTAGGTGC ACGGATCGAG
CATCTACGCG TCGACCTCCC GTCGGTGGCT GATCTGCCTA GCGGCCGCGT GCTCGCTAAC
CTCCACCTGG ACATCCAGCG AACCGACTCA CTGAACGCAG AGGCCGCCAA GGACGTTTCG
CTCGTCCTGC GGCTGCATTC AGTAGAAGCG CTCGAGAAGG CTGAGCTTGC GGCGGAAGCG
CTCGACGTTC TGGTCGACGC CTGCCGCCAT CTGGAACGTT TTCCGTTCCT GCGTTCAATC
TGCACGGCCT CGCAATTGAA CAAGGATGAC CCAGTGATGC AGGCGCTGCG GGCGTTCCTG
CCGGAGGCGA AATCCGTCGT CGCGGAGCAC GGCAAGTATT TGCAGACCCC GGTCACGGTA
CAGGATGATG TCTCTCCGGA AATGGAAGAC TTGCTCGCGC GTTGTGCCGC CGGCGACAAG
GTCTTCGGCA TCTTCGCCTT CAAGGAAAAG GCTTTCCGGC CGGCCGTCGA AGCAATCCGC
ATACTCTCGC GCCAACCATC GAGCTCTGAA GAATGGTTGC ACGTCCGCGA CTACGTGGCA
TGGCGCAAGC GCTTCACCGA TCTACGCCTC CGATGGAGCA GGCTGGTGCC AGAGCTTGCC
GCCGATGGTG TAGGCATAGA AGCGCCTCGA CACCTCTCCG AACTTGTGGA TGCACTGGAG
GACGTGCTCA TCGTGGCGCC CGGAATCCAT GACGGCCTTC AGGCAGGGCT GCGTGATGTA
GCCATCGGTG ACACGAACGG ATTGTGGGCC GACGAAGCCA AGCTGCGGAC CATCCGGACG
GCGCTCCGGA ATGCCATCGC GGCGGTCCGG CTCGCCTCCG CCAGGCTAGA AGTGGCGCGC
CTTTCCGAGC TTTTCGGAGA GAGCGGAGGG AAGTTCGGTC GAATGTCGAA GTCGTTTCTG
GACGAGGTGG TCGGCCGGGC CGGCCTTCCG GAAGCGCGCG TGGAAGAGAC CTGGACGAAG
CTGCTGCAGG CGATCGATGA CCTGGCCCGT CACCGCTCTC AATTCGTGAC TGTGCGCGAA
GGCGCGGACC ATCTCGAAGC TGCCGGTGCC CCTATATGGG CGGCCAAGCT ACGCGACAAG
GCTGCCCTAG ACGGGCAGGA TCTCGAGATG CCTTCCGATT GGCGCGAGGC ATGGGACTGG
GGCGCCGCTC AGGGCTACCT GTCGTCACTG GATCAGCGAG GCGCCCTCGG CCGCCTCACG
ACGGAACGTT CCAAGCTCGC AGAGACCGTC GCGAAGAGCT TCGAGCAACT TGTCCGCGAA
CGCACGTTTT ACGCTCTCGC CAGCTCGATG ACCGGCCAGG TCCGCGCGGC CTTGATGATG
TTCGCGACCG CCTTGAGAAA GGTAGGAAAG GGTACGGGCA AGGGTGCCAT GCGCCACCGT
CGCGACGCGC GCAAGGCGAT GGCAGCCTGT TACGATGGAG TGCCGTGCTG GATCATGCCA
TCTTGGCGTG TCGCTGAGCA GCTTCCAGGC GAACTGGGCA CCTTCGATCT GGTCATTATG
GACGAGGCGT CGCAGTCCGA CATTAAGGAG GTGACGGCTC TCCTACGTGG CCGCAAAATC
CTTGTCGTAG GAGACGACAA ACAGGTCAGC CCGACCGCCG CCTTCATCGA CAATGCGAAA
ATCGAAAGGC TTGAGCGCAC CTTCCTGACC AATCAGCCGT TCAAGACGTT GCTGCTGCCG
GGGGCGTCGC TGTACGACCT TGCCAAGGTG ATGTTTCCTG ACAAATTCGT CATGCTGCGC
GAGCACTTCA GGTGCGTCGA GCCGATCATC AGGTTCTCGA CACAGTTCTA CACTGAGGCG
CTTGTTCCGC TGCGTATCCC AACGACCCAT GAGCGCATCG ATCCTCCCCT GGTAGACATC
TACGTGCCCG ACGGCAAACG AACGGGCGAC AAGATCAATC ATCGGGAGGC GGAGGTTGTC
GTCTCGGAGA TTCTTAAAAT CGTCGAAAGC CCGATGCTAT CAAAGATAGG AGAGGGTGAT
CGTTGGCGCA GCATCGGCGT AATCTCGCTG ATCGGTTCGA AACAGGCAGC CTTGATCAAC
CGTATGCTGC TCGATGCCGT TGGCGAGGAG ACGTACATGC GCCACAGGAT CGCCTGCGGC
GACAGCGCGA CATTCCAGGG CAACGAGCGC GATATCGTCT TGCTTTCCAT GGTGGCGGAT
CCGGCGCACA AGCAGTCGCA GACCGCTCTC CACTTCGAGC AGCGCTTCAA CGTCGCCATG
TCCCGCGCAC GGGATCGGCT CTACTTGGTG AGGTCCGTCC GCGAGGAGGA GCTCAAACCT
GAGGATTTGA AGGCGAAAGT CCTTCGGCAT TTCCGGGACC CGATGAAGGG CAGCCAACGT
CCCGCGGGCG ATCTGGCTTC ATTGTGCGAT TCCGACTTCG AGCGGGCCGT TCTTAATCGA
CTCGTCGACC GCGGATATCG CGTTACCCCG CAGGTCGGTG CCATGGGGTT CAAGATCGAC
CTCGTGGTCG AAGGCGTCGG GGATCGCCGG CTGGCGATCG AATGCGATGG CGACAAATAC
CACGGCCCGG AAAAATGGGC CGACGACATG TCGAGGCAGC GCGTACTGGA ACGCGTTGGC
TGGCGCTTCT GGCGCTGCTG GGCATCGAGC TTCACCGTCG ATCCGGATGG CTGCATGGCC
GACCTTTTCC GGATATTGGA CGCAAACGGC ATTCAGCCGG CGCCCGCCGA GTTTCCGCCG
GAGCGCTATG CCGAGCAGCG GGTCGCGGAT GCGAGGAACG AATCCAAGGC AAAATCGGAC
GAAGTCGGCG TGGCGGGGGT GCGGTCCGAG AGTGGCATTA AGATTGGGGA CAGCATCGTC
GTGCGCTACC TTGATGATAA CAAGACGAGC AGCTTCGTGC TGAGCCGGGA CAGGCACGAC
CCCGTTAACG GTTTGATCGG TGCGGATACC GCGTTTGGAA AGCAAATACT CGGCTTCAGC
GAGGAAGACG AGATCGAGGT CGAGGATGCA GGCCGGAGCC GTCGTCTGCT AATAGTGCGG
GCCGCAAAAG AGGGCATCCG GTTGCACTAG
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| Protein sequence | MKGVEERRGG ADETPALRLS ELLDYVEQVI KLDERPTFRL SEYRLANGQT FTFHEHEFHA
LPGITHDLTD DDGAIWLSIE RLKRNDPPTP PDRSVPWIEL SPDPEKTPIT RGHVLITVPK
AECDAFVASG RARAEDCAES LAVGAKGQFD IRLRLEDWPE IATEIEDYIS QSWLPWSVAE
RPRRRSIALY QKLFEVAQIS EMGGAEQAIE LVWGIGLSRW MFEGTLIDLP LIERLVEIEI
DESAAGTIRV RPRQAPATVN LRPYDELKID GVPMAQDAAR RALSAVDEES GVSPFERDTF
ELVLRACQTQ LDPGGVYLPD SERIEPTVPP PPASENLVVT DRWVVAARKR SDNFLLQDIA
NLKHAIELSP ADLPGPSRTL VMGPAPSRSN RWGALPGSLG GASESTVADE PSAPLGDLFF
PKPFNDEQVE IVRRLEENDG VVVQGPPGTG KTHTISNIIC HYLALGRRVL VVSHGEPALS
VLRDQLPPEV RDLAISITTS EKEGFKQLEG AVRLLQSIIE SIRPGEQHRL IRNLENSIIG
MRGRIAEIDA EIGRLAEKQL SAVPGSDLRP AELAAAVVAS GDKYSWFVDR PAAFAADATF
DDGDFERIRE ARLALGARIE HLRVDLPSVA DLPSGRVLAN LHLDIQRTDS LNAEAAKDVS
LVLRLHSVEA LEKAELAAEA LDVLVDACRH LERFPFLRSI CTASQLNKDD PVMQALRAFL
PEAKSVVAEH GKYLQTPVTV QDDVSPEMED LLARCAAGDK VFGIFAFKEK AFRPAVEAIR
ILSRQPSSSE EWLHVRDYVA WRKRFTDLRL RWSRLVPELA ADGVGIEAPR HLSELVDALE
DVLIVAPGIH DGLQAGLRDV AIGDTNGLWA DEAKLRTIRT ALRNAIAAVR LASARLEVAR
LSELFGESGG KFGRMSKSFL DEVVGRAGLP EARVEETWTK LLQAIDDLAR HRSQFVTVRE
GADHLEAAGA PIWAAKLRDK AALDGQDLEM PSDWREAWDW GAAQGYLSSL DQRGALGRLT
TERSKLAETV AKSFEQLVRE RTFYALASSM TGQVRAALMM FATALRKVGK GTGKGAMRHR
RDARKAMAAC YDGVPCWIMP SWRVAEQLPG ELGTFDLVIM DEASQSDIKE VTALLRGRKI
LVVGDDKQVS PTAAFIDNAK IERLERTFLT NQPFKTLLLP GASLYDLAKV MFPDKFVMLR
EHFRCVEPII RFSTQFYTEA LVPLRIPTTH ERIDPPLVDI YVPDGKRTGD KINHREAEVV
VSEILKIVES PMLSKIGEGD RWRSIGVISL IGSKQAALIN RMLLDAVGEE TYMRHRIACG
DSATFQGNER DIVLLSMVAD PAHKQSQTAL HFEQRFNVAM SRARDRLYLV RSVREEELKP
EDLKAKVLRH FRDPMKGSQR PAGDLASLCD SDFERAVLNR LVDRGYRVTP QVGAMGFKID
LVVEGVGDRR LAIECDGDKY HGPEKWADDM SRQRVLERVG WRFWRCWASS FTVDPDGCMA
DLFRILDANG IQPAPAEFPP ERYAEQRVAD ARNESKAKSD EVGVAGVRSE SGIKIGDSIV
VRYLDDNKTS SFVLSRDRHD PVNGLIGADT AFGKQILGFS EEDEIEVEDA GRSRRLLIVR
AAKEGIRLH
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