| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0590 |
|---|
| Symbol | |
|---|
| ID | 4021058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 662255 |
|---|
| End bp | 663403 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637960777 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_567729 |
|---|
| Protein GI | 91975070 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGG ATACGCTGAC CACCCACGCC GGCATCGCCG TTCACGGCGC CGAGCGACTG
CCGTCCGTCG ACGTCGATAG CTACAATATC GAGCTCAAGG ACGATGACGG ATTTCTCGGC
GACCGCGCCA GCAAGGGCGC ATTCCAGCGC ATCCTCGACG CCTCCCGCAA GCCGCTGCGC
AAGAACGGCG AAGATCCGCT GGGCAAGAAG GCGACCGAGG AAATCTCCAA GGGGACGCTC
GATGATATCC TGAAAGGCGA CGACGTCGGT GCGGCTGCGC TGGTGCACGG CGCGATCGAG
GAATTCGCCC AGGAATTGGC CTTCGTCACC CGCCGCTTCC TCAAGACCAA GGCCTGGGCC
GACACCGAAT GCATCGTTGT CGGCGGCGGC TTCCGCCAGA GCCGGGTCGG CGAGCTGGCG
ATCGCGCGCA CCGACATCCT GCTCAAATCC GAGGGGCTGA AGGTCGATCT GGTGCCGATC
CGGTTCGATC CGGACGAAGC CGGGCTGATC GGCTGCCTGC ATCTGGCGCC GTCGTGGATT
TTCGAAGGCC ACGACAGCAT TCTGGCGGTC GATATCGGCG GCTCGAACAT CCGCTGCGGC
GTGGTCGAGA CCTTCTGGAA GAAGGCGCCG GATCTGTCGA AGGCCTCGGT CTGGAAAGTC
GAGCTGTGGC GGCACGCCGA GGACGAGCCG ACCCGCGAAG GCGCGGTGAA GCGGCTGACC
AAGATGCTCA AGGACCTGAT CGCAGACGCC GAGAAGGAGG GCTTCAAGCT CGCGCCGTTC
ATCGGGATTT CCTGCCCGGG CGTGATCAAT GCCGACGGCT CGATCGAGAA GGGCGCCCAG
AACCTGCCGG GCAATTGGGA AAGCAGCAAA TTCCACCTGC CGCGCAGCCT GATCGAGGGC
ATCCCGATGA TCGGCGACCA CGACACCGCG ATCCTGATGC ACAATGACGG CGTCGCCCAG
GGGCTGAGCG AAGTGCCGTT CATGCAGGAG TTCGACCGCT GGGGCGTGCT GACGATCGGC
ACCGGCCTCG GCAACGCCCG CTTCACCAAC CGGAAAACCA AGGAGAAGGC CAAAAAGGAC
AAGGCCAAGG ACGACAAGCC CAAGGAGAAG GAAAAAGAGA AGGACAAGGA GCGCAAGGAG
AAGGCGTAA
|
|---|
| Protein sequence | MAEDTLTTHA GIAVHGAERL PSVDVDSYNI ELKDDDGFLG DRASKGAFQR ILDASRKPLR
KNGEDPLGKK ATEEISKGTL DDILKGDDVG AAALVHGAIE EFAQELAFVT RRFLKTKAWA
DTECIVVGGG FRQSRVGELA IARTDILLKS EGLKVDLVPI RFDPDEAGLI GCLHLAPSWI
FEGHDSILAV DIGGSNIRCG VVETFWKKAP DLSKASVWKV ELWRHAEDEP TREGAVKRLT
KMLKDLIADA EKEGFKLAPF IGISCPGVIN ADGSIEKGAQ NLPGNWESSK FHLPRSLIEG
IPMIGDHDTA ILMHNDGVAQ GLSEVPFMQE FDRWGVLTIG TGLGNARFTN RKTKEKAKKD
KAKDDKPKEK EKEKDKERKE KA
|
|---|
| |