Gene RPD_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0580 
Symbol 
ID4021048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp652934 
End bp653887 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content60% 
IMG OID637960767 
ProductMaoC-like dehydratase 
Protein accessionYP_567719 
Protein GI91975060 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGAAAG ACATCATTGC CCGGCACTCT ACGCTCGTCC TCGCACGGGC AACCCGAACG 
TGCCGGCGTC ATCACAAGGA GATCGACTTG CCGATTGACC GGAATGCCTT GGGAGCAACG
CGCTCGGCGA CCAACGTGAT CACGCCGCGA TGGGTGCTTG CTTATGCATC GGCGCTGGGA
CTGTCGTCCG AATCTTACCT GGACGACAGC CGGCCTTCGA CGCTGATCAT TCCTCCGACC
TTCTGTGTCT GTTTGGAGTG GACACTCTCC GACATGGAGC GCGGCGTCAG CTCGCTCGGA
CTACGCGCCG ACGAACAGCG AGGCTCGGTC CATGCGCTCC AGGACTCTCG ATTTGAGCGC
CCCCTGAAAC TGGGCATGCG CGTTCGGACC GATAGCCGGG TGGAATACAT CGGACGGACC
AGCGCGGGCG CTTATGTTCT CACCAGTTTT CGGCATACCG ATGACGAGAC GGGCGATCGT
CTGATCACGT CGTACTCCGG GGCCATTCTG CGTGGCGTCG ATTTCGCGGA CGCTCCGCTC
GGAGAATTGC CGTCCGACCT CGCCGATGAG TCGGCTTCCG GCCTTGCGCA AATCTCGCTT
CCTGCGCTGC AATTGGAGCG AACACTGCCC CATATCTATT CCGAGTGCGC TCGCATCTGG
AATCCGATTC ACACCGAAAC TGCCGTTGCC AGAGCCGTTG GTCTCGACGA CATCATTGTT
CATGGCACCC TAACCTGGGC ATTGGCCGCA CGAGAGATTT GTCGCTCAGT CGACGCGTCC
GATTTGGGGC GCCTTGGTCG CCTGTCCGCA CAATTCCGTG CTCCGCTCGT CGCGGGCCGC
ACCATGACGA TCCGACCGAA CGAAATCCAA GCCAATGGCC AGTTGCGGTT TTCTGCAGTC
AACGAGCAGG GAAGAACAAT CCTCGCCAAC GGTCTCCTTG AAATCCTGCA CTGA
 
Protein sequence
MPKDIIARHS TLVLARATRT CRRHHKEIDL PIDRNALGAT RSATNVITPR WVLAYASALG 
LSSESYLDDS RPSTLIIPPT FCVCLEWTLS DMERGVSSLG LRADEQRGSV HALQDSRFER
PLKLGMRVRT DSRVEYIGRT SAGAYVLTSF RHTDDETGDR LITSYSGAIL RGVDFADAPL
GELPSDLADE SASGLAQISL PALQLERTLP HIYSECARIW NPIHTETAVA RAVGLDDIIV
HGTLTWALAA REICRSVDAS DLGRLGRLSA QFRAPLVAGR TMTIRPNEIQ ANGQLRFSAV
NEQGRTILAN GLLEILH