| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0568 |
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| Symbol | |
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| ID | 4021036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 642586 |
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| End bp | 643143 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637960755 |
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| Product | rRNA large subunit methyltransferase |
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| Protein accession | YP_567707 |
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| Protein GI | 91975048 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1576] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTTTCG CTGGCGGCGC ATTCCGCTGG CGGCGCGTTG CGAATGAGGC GGCGCAGCGC
GAAAGGCCCC GGCCGATGCG GCTGACCGTG ATTGCCATCG GCAAACTCAA GCAAGGCCCC
GAGCGCGAAC TCGCCGAGCG CTACCGTGGG CGGTTCGACG ATCTCGGCCG CAAGCTCGGC
TTTCGCGGCC TCGACATCCA TGAAATCGCC GAAAGCCGCG CCCGCGACGC CGCCGGCCGG
ATGGCCGAGG AAGCCGCCGC CATCGCGGCG CTGATTGCCG AGGGCAGCTC GCTGGTCACC
CTCGACGAGC GCGGCAAGAG CGTCGACAGC GCGGCCTTCG CCGCCCAGCT CGGCCGCTGG
CGCGATGAAT CGGTGCCCGG CACTATTTTC GTGATCGGCG GGGCGGACGG ACTTTTGCCT
GAATTGCGGC GCAAGGCAAA GCTGTGCCTA TCGTTTGGCG CCGCGACGTG GCCGCACCAG
ATGGTCCGAG TGATGCTGCT GGAGCAGATC TACCGGGCCG CAACGATTTT GGCGGGACAT
CCTTATCATC GTGCCTAG
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| Protein sequence | MRFAGGAFRW RRVANEAAQR ERPRPMRLTV IAIGKLKQGP ERELAERYRG RFDDLGRKLG
FRGLDIHEIA ESRARDAAGR MAEEAAAIAA LIAEGSSLVT LDERGKSVDS AAFAAQLGRW
RDESVPGTIF VIGGADGLLP ELRRKAKLCL SFGAATWPHQ MVRVMLLEQI YRAATILAGH
PYHRA
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