Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0566 |
Symbol | |
ID | 4021034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 639784 |
End bp | 641154 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637960753 |
Product | carboxyl-terminal protease |
Protein accession | YP_567705 |
Protein GI | 91975046 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGCA AGACTTCGGT AATCCTCCTC AGCGCCGTCA CGGGCGCTGC GCTGACACTT TTCGTCACCC AGCCGCGGTC GGTGCTGATG GGTTCGACTG CGCGGGCCGC GACGTCTGAC ACCTATCGTC AGCTCAATCT GTTCGGCGAC GTGTTCGAGC GGGTGCGTAG CGACTATGTC GAGAAGCCCG ACGACTCCAA ACTGGTGGAG TCCGCAATCA GCGGCATGCT GACCGGGCTC GACCCGCATT CGAGCTACAT GGACGCCAAG AGCTTCCGTG ACATGCAGGT GCAGACCCGC GGCGAGTTCG GCGGTCTCGG CATCGAAGTC ACCATGGAAG ACGGCCTGAT CAAGGTGGTG TCGCCGATCG ACGACACGCC GGCGTCGAAG GCCGGCATCA TGGCCAACGA CATCATCACC AATCTCGACG ACGAAGCGGT GCAGGGTCTG ACCCTGAACC AGGCGGTCGA GAAGATGCGC GGCCCGGTCA ACACCAAGAT CCGCCTGAAG ATCGTCCGCA AGGGCCAGGA CAATCCGATC GAGGTCACGC TGGTGCGCGA CAACATCCGG GTTCGTTCGG TGCGCGCCCG CGTCGAGTCC GACGACATCG GCTACATCCG GATCACCACT TTCAACGAGC AGACCACCGA GGGCTTGAAG AAGGAGATCT CCAATCTCAC CAGCCAGATC GGCGCCGACA AGCTGAAGGG CTTCATCCTC GACATGCGCA ACAACCCCGG CGGTCTGCTG GAGGAAGCGG TGACGGTGTC GGATGCGTTC CTCGATCGCG GCGAGATCGT CTCGACACGT GGCCGCAACG CCGAGGAAAC CCAGCGTCGC TCCGCGCATT CCGGCGATCT CACCAAGGGC AAACCGGTGA TCGTGCTGAT CAACGGCGGC TCCGCCTCGG CCTCTGAAAT CGTCGCCGGT GCGCTGCAGG ACCACAAGCG CGCGACGCTG GTCGGCACCC GGTCGTTCGG CAAGGGCTCG GTGCAGACCA TCATCCCGCT CGGCTCCGGC AACGGCGCGC TGCGGCTGAC CACGGCGCGC TACTACACGC CGTCCGGCAA ATCGATCCAG GCCAGGGGCA TCACCCCGGA TATCGAGGTG CTGCAGGATG TGCCGGACGA TCTCAAGGCG CGGACCGACA CCAAGGGCGA AGCCTCGCTG CGCGGCCATC TGAAAGGCGC CGACGGCGAC GAGAAGACCG GCTCGCAGTC CTACGTGCCA CCGGACGCCA AGGACGACAA GGCGCTCAAA ACCGCCGCCG ATCTGTTGCA CGGCATCAAG GCCACCGTCA CGGCGCCTGC GCCGGTGACG GGCGACAAGG CGGCGATCGA CAAGCCGGCC GCCAACAAGG CCGCGAACTG A
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Protein sequence | MMRKTSVILL SAVTGAALTL FVTQPRSVLM GSTARAATSD TYRQLNLFGD VFERVRSDYV EKPDDSKLVE SAISGMLTGL DPHSSYMDAK SFRDMQVQTR GEFGGLGIEV TMEDGLIKVV SPIDDTPASK AGIMANDIIT NLDDEAVQGL TLNQAVEKMR GPVNTKIRLK IVRKGQDNPI EVTLVRDNIR VRSVRARVES DDIGYIRITT FNEQTTEGLK KEISNLTSQI GADKLKGFIL DMRNNPGGLL EEAVTVSDAF LDRGEIVSTR GRNAEETQRR SAHSGDLTKG KPVIVLINGG SASASEIVAG ALQDHKRATL VGTRSFGKGS VQTIIPLGSG NGALRLTTAR YYTPSGKSIQ ARGITPDIEV LQDVPDDLKA RTDTKGEASL RGHLKGADGD EKTGSQSYVP PDAKDDKALK TAADLLHGIK ATVTAPAPVT GDKAAIDKPA ANKAAN
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