| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0566 |
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| Symbol | |
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| ID | 4021034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 639784 |
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| End bp | 641154 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637960753 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_567705 |
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| Protein GI | 91975046 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCA AGACTTCGGT AATCCTCCTC AGCGCCGTCA CGGGCGCTGC GCTGACACTT
TTCGTCACCC AGCCGCGGTC GGTGCTGATG GGTTCGACTG CGCGGGCCGC GACGTCTGAC
ACCTATCGTC AGCTCAATCT GTTCGGCGAC GTGTTCGAGC GGGTGCGTAG CGACTATGTC
GAGAAGCCCG ACGACTCCAA ACTGGTGGAG TCCGCAATCA GCGGCATGCT GACCGGGCTC
GACCCGCATT CGAGCTACAT GGACGCCAAG AGCTTCCGTG ACATGCAGGT GCAGACCCGC
GGCGAGTTCG GCGGTCTCGG CATCGAAGTC ACCATGGAAG ACGGCCTGAT CAAGGTGGTG
TCGCCGATCG ACGACACGCC GGCGTCGAAG GCCGGCATCA TGGCCAACGA CATCATCACC
AATCTCGACG ACGAAGCGGT GCAGGGTCTG ACCCTGAACC AGGCGGTCGA GAAGATGCGC
GGCCCGGTCA ACACCAAGAT CCGCCTGAAG ATCGTCCGCA AGGGCCAGGA CAATCCGATC
GAGGTCACGC TGGTGCGCGA CAACATCCGG GTTCGTTCGG TGCGCGCCCG CGTCGAGTCC
GACGACATCG GCTACATCCG GATCACCACT TTCAACGAGC AGACCACCGA GGGCTTGAAG
AAGGAGATCT CCAATCTCAC CAGCCAGATC GGCGCCGACA AGCTGAAGGG CTTCATCCTC
GACATGCGCA ACAACCCCGG CGGTCTGCTG GAGGAAGCGG TGACGGTGTC GGATGCGTTC
CTCGATCGCG GCGAGATCGT CTCGACACGT GGCCGCAACG CCGAGGAAAC CCAGCGTCGC
TCCGCGCATT CCGGCGATCT CACCAAGGGC AAACCGGTGA TCGTGCTGAT CAACGGCGGC
TCCGCCTCGG CCTCTGAAAT CGTCGCCGGT GCGCTGCAGG ACCACAAGCG CGCGACGCTG
GTCGGCACCC GGTCGTTCGG CAAGGGCTCG GTGCAGACCA TCATCCCGCT CGGCTCCGGC
AACGGCGCGC TGCGGCTGAC CACGGCGCGC TACTACACGC CGTCCGGCAA ATCGATCCAG
GCCAGGGGCA TCACCCCGGA TATCGAGGTG CTGCAGGATG TGCCGGACGA TCTCAAGGCG
CGGACCGACA CCAAGGGCGA AGCCTCGCTG CGCGGCCATC TGAAAGGCGC CGACGGCGAC
GAGAAGACCG GCTCGCAGTC CTACGTGCCA CCGGACGCCA AGGACGACAA GGCGCTCAAA
ACCGCCGCCG ATCTGTTGCA CGGCATCAAG GCCACCGTCA CGGCGCCTGC GCCGGTGACG
GGCGACAAGG CGGCGATCGA CAAGCCGGCC GCCAACAAGG CCGCGAACTG A
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| Protein sequence | MMRKTSVILL SAVTGAALTL FVTQPRSVLM GSTARAATSD TYRQLNLFGD VFERVRSDYV
EKPDDSKLVE SAISGMLTGL DPHSSYMDAK SFRDMQVQTR GEFGGLGIEV TMEDGLIKVV
SPIDDTPASK AGIMANDIIT NLDDEAVQGL TLNQAVEKMR GPVNTKIRLK IVRKGQDNPI
EVTLVRDNIR VRSVRARVES DDIGYIRITT FNEQTTEGLK KEISNLTSQI GADKLKGFIL
DMRNNPGGLL EEAVTVSDAF LDRGEIVSTR GRNAEETQRR SAHSGDLTKG KPVIVLINGG
SASASEIVAG ALQDHKRATL VGTRSFGKGS VQTIIPLGSG NGALRLTTAR YYTPSGKSIQ
ARGITPDIEV LQDVPDDLKA RTDTKGEASL RGHLKGADGD EKTGSQSYVP PDAKDDKALK
TAADLLHGIK ATVTAPAPVT GDKAAIDKPA ANKAAN
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