Gene RPD_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0564 
Symbol 
ID4021032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp637751 
End bp638254 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content65% 
IMG OID637960751 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_567703 
Protein GI91975044 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.985512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCT ACGAAGACCT GCCCTATCGA ACATGCGTCG GCATGATGCT GATCAACCGG 
GAGGGTCTCG TCTTCATCGG GCGTCGCGCT GGCGGCATCG AGCATGTCGA CGACACCCAC
GTCTGGCAGA TGCCGCAAGG CGGCGTTGAT CCCGGCGAAG ACACCTGGGA AGCCGCCAAG
CGCGAGCTGT ACGAGGAGAC CAACGTCCGC TCGGTCGAAA AGATCGGCGA AGTTCCCGAC
TGGCTGATCT ACGACATTCC GCGCACCGTC GCCGGCCGAG CCTGGAAAGG CCGCTACCGC
GGCCAGCGCC AGAAATGGTT CGCGGTGCGC TTCACCGGCG CAGATTCCGA GATCGACGTC
GGCGCGCCCG GCGGCCACAA GCCGGAATTC ACCGGCTGGC GCTGGGAGCC GATGCAGAAT
CTCCCCGATC TGATCGTGCC GTTCAAACGG CCGGTCTATG AGCGGGTGGT GAAGGAATTC
TCGCAGCTCG CGGTGGCGGT CTGA
 
Protein sequence
MARYEDLPYR TCVGMMLINR EGLVFIGRRA GGIEHVDDTH VWQMPQGGVD PGEDTWEAAK 
RELYEETNVR SVEKIGEVPD WLIYDIPRTV AGRAWKGRYR GQRQKWFAVR FTGADSEIDV
GAPGGHKPEF TGWRWEPMQN LPDLIVPFKR PVYERVVKEF SQLAVAV