| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0560 |
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| Symbol | atpC |
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| ID | 4021028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 634081 |
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| End bp | 634536 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637960747 |
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| Product | F0F1 ATP synthase subunit epsilon |
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| Protein accession | YP_567699 |
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| Protein GI | 91975040 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.624995 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACCCGC GGGTCAAGCC CGCGGGTGAC AGCCGAGAGA GTAGCTCCAT GGCCACCTTC
CACTTCGATC TGGTTTCGCC CGAACAGGTT GCCTTCTCCG GCGAAGTCGA TCAGGTCGAC
ATCCCGGGCG CCGAGGGTGA TTTCGGCGTG CTCGCCGGTC ACGCGCCGGT GGTGGCGGTG
ATCCGTCCCG GCATCCTGAC GGTGACCGCC GGCGGTGCTC AGCAGAAGAT CGTGGTGCTC
GGCGGTATCG CCGAAGTCTC CGAGAAGGGC CTGACCGTGC TGGCCGATGT CGCCACCGCG
GTGGCCGACC TCGACATGCA GGACTTCGCC GCGACCATCG CGACGATGGA GCAGCAGCTC
CCCGGCAAGG TCGGCGACGT CCTCGATCGC TCAATCGAGC GCCTGGATCA CTACAAGAGC
ATCCAGCACC AGATCTCGAC GACTGCGATG CACTGA
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| Protein sequence | MDPRVKPAGD SRESSSMATF HFDLVSPEQV AFSGEVDQVD IPGAEGDFGV LAGHAPVVAV
IRPGILTVTA GGAQQKIVVL GGIAEVSEKG LTVLADVATA VADLDMQDFA ATIATMEQQL
PGKVGDVLDR SIERLDHYKS IQHQISTTAM H
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