Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0550 |
Symbol | |
ID | 4021018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 621944 |
End bp | 623347 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637960737 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_567689 |
Protein GI | 91975030 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00865571 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.262982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCT ACGATCTCGT CATCATCGGC ACCGGCCCCG GCGGCTATGT CTGCGCGATC CGCGCGGCGC AGCTTGGTCT CAAGGTCGCA GTGGTGGAAA AGAACGCCAC GCTCGGCGGC ACCTGCCTGA ATGTCGGCTG CATGCCGTCG AAGGCGCTGC TGCACGCCTC GGAGCTGTTC GAGGAGGCCG GGCACTCGTT CGCCAAGATG GGAATCGGCG TGCCGGCGCC GACGCTCGAT CTGCCGGCGA TGATGAACTT CAAGCAGCAG GGCATCGACG GCAACGTCAA GGGCGTCGAA TACCTGATGA AGAAGAACAA GATCGACGTG CTGGTCGGCC GCGGCAGGGT GCTGGGCGCC GGCAAGGTCG AGGTCACCGG CAATGACGGC AAGGCCCAGA CGGTCGAGAC CAAGTCGATC GTGATCGCCA CTGGCTCGGA CGTGGCCAAG CTCAAGGGCA TCGCGATCGA CGAGAAGCGC GTGGTGTCGT CGACCGGCGC GCTGTCGCTC GACAAGGTAC CGGAAAGACT GATCGTGGTC GGCGCCGGCG TGATCGGGCT CGAGCTCGGC TCGGTGTGGC GGCGGCTTGG CGCGCAGGTC ACCGTCGTCG AATTCCTCGA CCGTATCCTG CCCGGCATGG ATTCCGAGAT CGTCAAGCAG TTCCAGCGCA TCCTCGAGAA GCAGGGTTTT GCCTTCAAGC TCGGCGCCAA GGTCACCGGC GTCGATAGTT CGGGCGCAAA GCTTGCGGTG AAGGTCGAGG CGGCGGCCGG CGGCAATCCG GAGACGCTCG AAGCCGACGT CGTGCTGGTC GCGATCGGCC GGGTGCCCTA CACCGAAGGC CTCGGGCTGA AAGAGGCCGG CGTCGCGCTC GACGAGCGCG GCCGCGTCGT GATCGACAAT CACTTCGCCA CCAGCGTCAA GGGCGTCTAC GCGATCGGCG ACGTCGTCAG AGGTCCGATG CTGGCGCACA AGGCCGAGGA CGAGGGCGTC GCGGTCGCCG AGCTGCTCGC CGGCAAGGCC GGGCATGTGA ACTACGACGT CATTCCGGGC GTGGTCTACA CCACGCCGGA GGTGTCGTCG GTCGGCAAGA CCGAGGAAGA CCTCAAGCAG GCCGGAATCG CCTACACGGT CGGCAAATTC CCGTTCACCG CGAATGGCCG CTCCAAGGTC AACCAGACCA CCGACGGTCT GGTGAAGATC CTCGCCGACG CCAAGACCGA CCGCGTGCTC GGCGTGCACA TTGTCGGCCG CGAAGCCGGC GAGTTGATCC ACGAGGCCGC GGTGCTGATG GAGTTCGGCG GCTCGGCCGA AGATCTCGCG CGCACCTGCC ACGCTCACCC GACCCGCTCG GAAGCCGTCA AGGAAGCCGC GCTTGCGGTG GGAAAACGCG CCATCCATAT GTGA
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Protein sequence | MATYDLVIIG TGPGGYVCAI RAAQLGLKVA VVEKNATLGG TCLNVGCMPS KALLHASELF EEAGHSFAKM GIGVPAPTLD LPAMMNFKQQ GIDGNVKGVE YLMKKNKIDV LVGRGRVLGA GKVEVTGNDG KAQTVETKSI VIATGSDVAK LKGIAIDEKR VVSSTGALSL DKVPERLIVV GAGVIGLELG SVWRRLGAQV TVVEFLDRIL PGMDSEIVKQ FQRILEKQGF AFKLGAKVTG VDSSGAKLAV KVEAAAGGNP ETLEADVVLV AIGRVPYTEG LGLKEAGVAL DERGRVVIDN HFATSVKGVY AIGDVVRGPM LAHKAEDEGV AVAELLAGKA GHVNYDVIPG VVYTTPEVSS VGKTEEDLKQ AGIAYTVGKF PFTANGRSKV NQTTDGLVKI LADAKTDRVL GVHIVGREAG ELIHEAAVLM EFGGSAEDLA RTCHAHPTRS EAVKEAALAV GKRAIHM
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