| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0548 |
|---|
| Symbol | |
|---|
| ID | 4021016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 621392 |
|---|
| End bp | 621646 |
|---|
| Gene Length | 255 bp |
|---|
| Protein Length | 84 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637960735 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_567687 |
|---|
| Protein GI | 91975028 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000621957 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.212839 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTCG TTGCGATGGT CGACGGGGTC AAGATCGAAT TCTATCCCGA CGAGCATCCG
CCGCCGCATT TTCACGCCCG CTACGCCGAA CACGTCGCCC AGATCGAAAT CCGGACCGCC
AAGGTCTTGC GCGGCTCGCT GCCGCCCGCG AAACTCGGGC GCGTTTTGTC CTGGGCGTCG
AGGCACTATA TGGGCCTGAT GGACGCCTGG ACCGCGGTCG AGGAACTACG CAAGCCGGAG
AAGATCGATG ACTGA
|
|---|
| Protein sequence | MPVVAMVDGV KIEFYPDEHP PPHFHARYAE HVAQIEIRTA KVLRGSLPPA KLGRVLSWAS
RHYMGLMDAW TAVEELRKPE KIDD
|
|---|
| |