| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0545 |
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| Symbol | |
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| ID | 4021013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 618849 |
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| End bp | 620150 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637960732 |
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| Product | dihydrolipoamide succinyltransferase |
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| Protein accession | YP_567684 |
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| Protein GI | 91975025 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0940498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.374413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACA TTCGCGTTCC GACGCTCGGC GAATCGGTGA CCGAGGCGAC GATCGGTCGC
TGGTTCAAGA AGCAGGGCGA TGCCGTCGCG GTCGACGAGC CGCTGGTCGA ACTCGAGACC
GACAAGGTCA CCATCGAAGT GCCGGCGCCA TCGGCCGGCA CGCTCGGCGA AATCATCGCC
AAGGACGGCG AGACCGTCGC CGTCGGCGCG CTGCTGGGCC AGATCTCGGA AGGCGGCGGC
GCCGCCAAGC CGGCCGCCAA GGACACCCCG AAGGCGACCG CGGCAGTCGC GCCGGAAACG
ACCACCGGCC GTCCGGATCT CAAGACCGAC ACCACCAAGC CGATCAATGC CGGCCCCGAA
GAGGTCCGGC CGAAGCCCGA GCTGAAGACC CCGCCGTCCG ACGCGCCGCA GGCGCCGTCG
GTGCGCCGGC TGTCGAGCGA AAGCGGCGTC GACGCCGCGA CCGTGCCGGG CTCCGGCAAG
GACGGCCGCG TCACCAAGGG CGACATGCTG GCGGCGATCG AGAAGGCGGC GTCGGCGCCG
ACCCCGGTCA ACCAGCCCGC CGCGGCGATG CAGGTCCGCG CCCCGTCGCC GGCCGACGAC
GCCGCGCGCG AAGAGCGGGT CAAGATGACC CGGCTGCGCC AGACCATCGC GCGACGGCTC
AAGGAAGTTC AGAACACCGC CGCGATGCTG ACGACCTTCA ACGAGGTCGA CATGACCAAC
GTCATGGCGC TGCGGGCGCA GTACAAGGAC GTGTTCGAGA AGAAGCACGG CGCCAAGCTC
GGCTTCATGG GCTTCTTCAC CAAGGCCTGC GTGCAGGCGC TGAAGGACAT CCCGGCCGCC
AATGCCGAGA TCGACGGCAC CGATCTGATC TACAAGAACT ACTACCATGT CGGCGTCGCG
GTCGGCACCG ACAAGGGTCT GGTGGTGCCG GTGGTGCGCG ACTGCGATGA GAAGTCGATC
GCCGACATCG AAAAGAGCAT CGCCGATTTC GGCAAGCGCG CCCGCGACGG CCAGCTCAAG
ATCGAGGAGA TGCAGGGCGG CACCTTCACC ATCACCAATG GCGGCATCTA CGGTTCGCTG
ATGTCGACGC CGATCCTCAA CGCGCCGCAA TCGGCCATTC TCGGAATGCA CAAGATCCAG
GAGCGGCCGG TGGCGATCGG CGGCAAGGTC GAAGTGCGGC CGATGATGTA TCTGGCGCTC
AGCTACGATC ACCGCGTGAT CGACGGCAAG GAAGCGGTCA CCTTCCTGGT CCGCGTCAAG
GAAAGCCTGG AAGACCCGGC GCGGCTGGTG CTGGATCTGT AA
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| Protein sequence | MTDIRVPTLG ESVTEATIGR WFKKQGDAVA VDEPLVELET DKVTIEVPAP SAGTLGEIIA
KDGETVAVGA LLGQISEGGG AAKPAAKDTP KATAAVAPET TTGRPDLKTD TTKPINAGPE
EVRPKPELKT PPSDAPQAPS VRRLSSESGV DAATVPGSGK DGRVTKGDML AAIEKAASAP
TPVNQPAAAM QVRAPSPADD AAREERVKMT RLRQTIARRL KEVQNTAAML TTFNEVDMTN
VMALRAQYKD VFEKKHGAKL GFMGFFTKAC VQALKDIPAA NAEIDGTDLI YKNYYHVGVA
VGTDKGLVVP VVRDCDEKSI ADIEKSIADF GKRARDGQLK IEEMQGGTFT ITNGGIYGSL
MSTPILNAPQ SAILGMHKIQ ERPVAIGGKV EVRPMMYLAL SYDHRVIDGK EAVTFLVRVK
ESLEDPARLV LDL
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