| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0544 |
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| Symbol | sucA |
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| ID | 4021012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 615785 |
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| End bp | 618742 |
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| Gene Length | 2958 bp |
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| Protein Length | 985 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637960731 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_567683 |
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| Protein GI | 91975024 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.898698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.505126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCGCC AGGACGCGAA TGCCGCTTTC GCCCTTTCTT CGTTTCTCCA GGGCGCGAAT
GCCACCTATA TCGACGATCT CTACTCCCGC TACGAAAACG ACCCGTCGTC CGTCGATGCC
GATTGGCAGG CATTCTTCAA AAGTCTGAAG GACAATCCTG GCGACATCCA GAAGAACGCC
GAAGGCCCGT CCTGGGGGCA GGCCAACTGG CCGCTGACCC CGCGCGACGA TTTGACCTCG
GCGCTGGACG GCAACTGGGC CCAGGTCGAG AAGACCGTCG GCCAGAAGAT CCAGACCAAG
GCGCAGACCC GCGGCGTCGA ACTGTCGCCG GCCGACGTCA ACCAGGCCAC CCGCGATTCC
GTCCGCGCGC TGATGCTGAT CCGCGCCTAT CGCATGCGTG GCCACTTCCA CGCCAAGCTC
GATCCGCTCG GCCTGTCGCC GCCCAAGGAT CACGAAGAGC TCGACATCCG CAGCTACGGC
TTCACCGAGG CCGATCTCGA CCGCAAGATC TTCCTCGATC ACGTGCTGGG CCTGGAATAT
GGCAGCCTGC GCGAGATCGT CGCGATCTGC GAGCGCACCT ATTGCCAGAC CATGGGCATC
GAGTTTCTGC ATATCTCCAA CGGGGCGCAG AAGGCCTGGC TGCAGGAGCG GATCGAAGGT
CCGGACAAGG AAATCAGCTT CACCCGCGAG GGGCGTCGCG CGATCCTGAT GAAGCTGGTC
GAGGCCGAGG GCTTCGAGCG GTTCTGCGAC CTCAAATTCA CCGGCACCAA GCGGTTCGGC
CTCGACGGCG GCGAATCGCT GATCCCGGCG CTGGAGCAGA TCATCAAGCG CGGCGGCAAT
CTCGGCGTCC GCGAGATCGT GCTCGGGATG CCGCATCGCG GCCGCCTCAA CGTGCTGACC
CAGGTGATGG GCAAGCCGCA CCGCGCGCTG TTCCATGAAT TCAAGGGCGG CTCGGCCAAT
CCGGACGAGG TCGAAGGCTC CGGCGACGTC AAATATCACC TCGGCGCTTC GTCGGACCGC
GAGTTCGACC ACAACAAGGT CCACCTGTCG CTGACCGCCA ACCCGTCGCA TCTCGAGATC
GTCGATCCGG TGGTGCTGGG CAAGGTCCGC GCCAAGCAGG ACCAGCACGG CGACTTGCCG
GAAGAGCGCC TCTCGGTGCT GCCGCTGCTG ATGCATGGCG ACGCGGCGTT CGCCGGACAG
GGCGTGGTCG CGGAATGCTT CGGCCTGTCC GACCTGAAGG GCTACCGCAC CGGCGGTTCG
ATCCACTTCA TCGTCAACAA CCAGATCGGC TTCACCACCT ATCCGCGCTA TTCGCGGTCC
TCGCCGTATC CGTCGGACGT CGCCAAGATG ATCGACGCGC CGATTTTCCA CGTCAACGGC
GACGATCCGG AAGCCGTGGT GTTCGCGGCC AAGATCGCGG TCGAGTACCG GCAGAAGTTC
CACAAGCCGG TCGTGATCGA CATGTTCTGC TATCGTCGCC ACGGCCATAA CGAGGGCGAC
GAGCCGGCCT TCACCCAGCC GATGATGTAT CGCAAAATCG CGGGCCATCC GTCGGCGCTG
GAACTGTATT CGAAGCGGCT GATCGCCGAC GGCGTGATCA CCGAAGGCGA GGTCGAGAAG
GCCAAGGCCG ACTGGCGCGC CCGGCTCGAC GCCGAGCTCG AGGCCGGCTC CAGCTATCGC
CCCAACAAGG CCGACTGGCT CGACGGCAAA TGGGCCGGCT TCAAATCCGC CGATCAGGAA
GAGGATCCGC GCCGCGGCAT CACCGGCGTC GATCTCGCGC AGCTCAAGGA TATCGGCCGC
AAGATCACCA AGGTGCCGGA AGGCTTCCGG GTTCACCGCA CCGTGGCGCG CTATCTGGAG
AACCGCGCCA AGGCGATCGA TTCCGGCGTC GGCATCGACT GGGCGACCGG CGAGGCGCTG
GCGTTCTGCA CCCTGCTGCA GGAGGGCCAC CGCGTCCGCC TGTCCGGTCA GGACTCCGAG
CGCGGCACCT TCTCGCAGCG CCATTCGGTG CTGTTCGATC AGGAAGACGA GACCCGCTAC
ACCCCGTTCA ACCACCTCAC GCCCGAGCAG GGCCATTACG AGGTGATCAA CTCGCTGCTG
TCCGAAGAAG CCGTGCTCGG CTTCGAATAC GGCTACTCGC TGGCCGAGCC GAACGCGCTG
ACGATCTGGG AAGCGCAGTT CGGCGATTTC GCCAACGGCG CGCAGGTGCT GTTCGACCAG
TTCATCTCGT CGGGCGAGCG CAAATGGCTG CGGATGTCCG GTCTCGTCTG CATGTTGCCG
CACGGCTATG AGGGCCAGGG ACCGGAGCAC TCGTCCGCCC GGCTCGAGCG CTTCCTGCAG
ATGTGCGCCG AGGACAACAT GCAGGTGGTC TACGCCACCA CGCCGGCGAA TTTTTTCCAC
GTGCTGCGCC GCCAGCTCCG TCGCGAGATC CGCAAGCCGC TGATCCTGAT GACGCCGAAA
TCGCTGCTGC GCCACAAGCG GGCGGTGTCG CGGCTCGACG AACTCGGCCC CGATACCAGC
TTCCACCGCG TGCTGGCCGA CGATGCGCAG TTGCTGCCGG ACGAGAAGAT CAAGCTCGCC
CCGGACAACA AGATCCGCCG CGTCGTGATC TGCTCCGGCA AGGTCTATTA CGACCTCTAC
GAGGAGCGCG AGAAGCGCGG CGTCGACGAC GTCTATCTGC TGCGCGTCGA GCAGCTCTAT
CCGGTGCCGC TGAAGACGCT GGTGCAGGAG ATGTCGCGTT TCAAGGAAGC CGAGCTGGTG
TGGTGCCAGG AAGAGCCGCG CAACATGGGG GCGTGGCACT TCATCGAACC TTATCTGGAG
TGGGTGCAGA ATCAGGCGGG GGCGACCCAT CGCCGCCCGC GTTATGTCGG CCGCCCGGCA
TCCGCGGCCA CCGCGTCCGG CCTGATGTCG AAGCATCTGG CCCAGCTCAA GGCGTTCCTC
GACGAGGCGC TGCGCTGA
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| Protein sequence | MSRQDANAAF ALSSFLQGAN ATYIDDLYSR YENDPSSVDA DWQAFFKSLK DNPGDIQKNA
EGPSWGQANW PLTPRDDLTS ALDGNWAQVE KTVGQKIQTK AQTRGVELSP ADVNQATRDS
VRALMLIRAY RMRGHFHAKL DPLGLSPPKD HEELDIRSYG FTEADLDRKI FLDHVLGLEY
GSLREIVAIC ERTYCQTMGI EFLHISNGAQ KAWLQERIEG PDKEISFTRE GRRAILMKLV
EAEGFERFCD LKFTGTKRFG LDGGESLIPA LEQIIKRGGN LGVREIVLGM PHRGRLNVLT
QVMGKPHRAL FHEFKGGSAN PDEVEGSGDV KYHLGASSDR EFDHNKVHLS LTANPSHLEI
VDPVVLGKVR AKQDQHGDLP EERLSVLPLL MHGDAAFAGQ GVVAECFGLS DLKGYRTGGS
IHFIVNNQIG FTTYPRYSRS SPYPSDVAKM IDAPIFHVNG DDPEAVVFAA KIAVEYRQKF
HKPVVIDMFC YRRHGHNEGD EPAFTQPMMY RKIAGHPSAL ELYSKRLIAD GVITEGEVEK
AKADWRARLD AELEAGSSYR PNKADWLDGK WAGFKSADQE EDPRRGITGV DLAQLKDIGR
KITKVPEGFR VHRTVARYLE NRAKAIDSGV GIDWATGEAL AFCTLLQEGH RVRLSGQDSE
RGTFSQRHSV LFDQEDETRY TPFNHLTPEQ GHYEVINSLL SEEAVLGFEY GYSLAEPNAL
TIWEAQFGDF ANGAQVLFDQ FISSGERKWL RMSGLVCMLP HGYEGQGPEH SSARLERFLQ
MCAEDNMQVV YATTPANFFH VLRRQLRREI RKPLILMTPK SLLRHKRAVS RLDELGPDTS
FHRVLADDAQ LLPDEKIKLA PDNKIRRVVI CSGKVYYDLY EEREKRGVDD VYLLRVEQLY
PVPLKTLVQE MSRFKEAELV WCQEEPRNMG AWHFIEPYLE WVQNQAGATH RRPRYVGRPA
SAATASGLMS KHLAQLKAFL DEALR
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