Gene RPD_0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0543 
Symbol 
ID4021011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp614527 
End bp615342 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content63% 
IMG OID637960730 
Producthypothetical protein 
Protein accessionYP_567682 
Protein GI91975023 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.530705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGGG ATCTTCTGAA TACAGTGCCG CCGTCACAGC TCCTGGTCAT TCAGCTGACC 
GCGAGCGTCG CCGCGCTGGC AGGCCTCGCC CTGCCGAACA TGCCGTGGCG CTACCGATCA
CGGGGGATGT TGCGCGCGTC GGCGATCGGC ATCCTGGAGC CCGGCCTGAC CTATTCGATC
GGCCTGATCG GGCTGTCCCT GACGACGGCC GGCAGCGCTT CGATCATCGG GGCGACCGAA
CCGATCATGA TCGTCTTGAT AGCGTGGCTG TTTCTCAGCC AGCGGCCGTC GCCGAGGCTT
GCGGTCTGCA TCGTTATTGC GGTGATCGGC TTGCTGATGG TGTCCGGCGA GACCCTCTTC
AGGCCCGGAC AAGGGAATGC GCTCGGAGAT GGCCTGATCG TTTTGGCGAC CGTCTCGGCC
GCGAGTTATG TGGTGCTGTC GGCGAAAGTG GCGGCTCATT TTCCCGCCGC GACGCTTGCG
ATGGCGCAGC AACTGGCCGG CCTCGCTTTC GTGTTTGCCG TATTTGTCGT CGTTCAAGCC
TTTGGCCTGG AGCGTCCGAT CCTTGCCGAG CTTTCGCTGT CGATCGTCGC CTATGCGGCG
GTGTCCGGAA TCATTCAGTA TGCAATCGCG TTCTGGCTCT ACCTGATCGG CTTGCGTTAT
CTGACCCCGG GCGCCGCCGG CCTCTGGCTC ACGCTGGTCC CGGTGTTCGG CATCTTCGGA
GCGTTTGTCT GGCTTGACGA GATTCCGACG CCGGTGATGC TGGCCGGAGC GGCGCTGATC
ATCGGGGCCG TCCTCATCGG CAAAGCCGAA AAATAG
 
Protein sequence
MSRDLLNTVP PSQLLVIQLT ASVAALAGLA LPNMPWRYRS RGMLRASAIG ILEPGLTYSI 
GLIGLSLTTA GSASIIGATE PIMIVLIAWL FLSQRPSPRL AVCIVIAVIG LLMVSGETLF
RPGQGNALGD GLIVLATVSA ASYVVLSAKV AAHFPAATLA MAQQLAGLAF VFAVFVVVQA
FGLERPILAE LSLSIVAYAA VSGIIQYAIA FWLYLIGLRY LTPGAAGLWL TLVPVFGIFG
AFVWLDEIPT PVMLAGAALI IGAVLIGKAE K