| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0533 |
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| Symbol | |
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| ID | 4021001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 605725 |
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| End bp | 606261 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637960720 |
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| Product | 2',5' RNA ligase |
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| Protein accession | YP_567672 |
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| Protein GI | 91975013 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.883714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGTT TGTTCACTGG ACTGGAAATT CCCGCCGAGG TCACCAGCAC CCTGTCCAAT
CTGCGCGGCG GGCTTCCTGG GGCTCGCTGG ATCGAGCCGG AAAACTACCA CCTCACGCTG
CGCTTCATCG GCGATATCGA CGGCGTCACC GCCAACGAGA TCGCCTCGAC GCTGTTCAGG
ATCAACCGCA AGCCGTTCGA GGTCGCGCTG CAGGGGCTGT CGAGCTTCGG CGGCCGCAAG
CCGCGCGCGG TGGTGGCGTC CGTGGTGCCG TCGAAGCCGC TGATCGAATT GCAGGCCGAG
CTGGAGCGCC TGTTGCAGCG GGTCGGGCTC GATCCGGAGG GTCGCAAATT CACCCCGCAT
GTGACGCTGG CCCGGCTGCG CGACGTATCC TGCCAGGACG TCGCGGATTA TCTGTCGATC
CGCGGTTATT TCCCCACCAA GGTGTTCAAG GCCGAGCGCT TCGTGCTGTT CTCGTCGCGC
GCCTCCACCG GCGGCGGGCC GTATGTGGTC GAGGCGCCCT ACGAGCTCAC CCCCTGA
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| Protein sequence | MPRLFTGLEI PAEVTSTLSN LRGGLPGARW IEPENYHLTL RFIGDIDGVT ANEIASTLFR
INRKPFEVAL QGLSSFGGRK PRAVVASVVP SKPLIELQAE LERLLQRVGL DPEGRKFTPH
VTLARLRDVS CQDVADYLSI RGYFPTKVFK AERFVLFSSR ASTGGGPYVV EAPYELTP
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