Gene RPD_0528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0528 
Symbol 
ID4020996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp599552 
End bp600097 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content68% 
IMG OID637960715 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_567667 
Protein GI91975008 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC TCCTGATCCG CCCCGCCACG ACCGACGACC TGCCCGCCGT CACCGCGATC 
TACGACGAGG CCGTCCGCAC CGGCACCGCG ACCTTCGAGC TGACGCCGCC GGACCTTGCC
GAGATGACGC GGCGGTTCGA GACGCTGACC GGCGGCGGCT TTCCCTATCT GGTCGGGCTG
CTGGATGGCC GCGTCGCCGG CTATGCCTAT GCGGGGCCGT ACCGGCCGCG GCCGGCCTAT
CGCTTCACCG TCGAGAATTC GGTCTATCTC GATCCGGCGA CGCATCGCCG CGGCCTCGGC
ACCGCGCTGA TGCGCGAGCT GATCGCGCAA TGCGAGGCGC GCGGCTTTCG CCAGATGATC
GCGGTGATCG GCGATTCAGC CAATTCCGGA TCGGTCGGCG TGCATCGCAA GACCGGCTTC
GACATGATCG GCACCCACCG CAATGTCGGC TTCAAATTCG GCCGCTGGCT CGACACCGTG
ATGATGCAGC GCGCGCTGGG CGACGGCGGC GAGACGGTGC CGGAGCAGCG CGAGATCGAG
CTATAG
 
Protein sequence
MSDLLIRPAT TDDLPAVTAI YDEAVRTGTA TFELTPPDLA EMTRRFETLT GGGFPYLVGL 
LDGRVAGYAY AGPYRPRPAY RFTVENSVYL DPATHRRGLG TALMRELIAQ CEARGFRQMI
AVIGDSANSG SVGVHRKTGF DMIGTHRNVG FKFGRWLDTV MMQRALGDGG ETVPEQREIE
L