| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0515 |
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| Symbol | |
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| ID | 4020983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 587134 |
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| End bp | 588465 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637960702 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_567654 |
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| Protein GI | 91974995 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.481565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTCG AGATCGTCAC CTTCGGTTGT CGCCTCAACG CGTTCGAATC CGAAGTGATC
CGCCGCGAGG CCGAAGGTGC GGGTCTTCAC GACGCCATCG TCATCAACAG CTGCGCGGTC
ACCAACGAGG CGGTGGCGCA GGCGCGGCAG CAAATCCGCA AGTTGAAGCG CGAGCGGCCG
GGCGCCCGCA TCGTCGTGAC CGGCTGTGCG GCGCAGACCG AGCCGGCCAC CTTCGCAGGC
ATGGACGAAG TCGATCGCGT CATCGGCAAT GACGACAAGA TGCGCTCCGA GGCCTGGCGC
GCCGCGCGCA TCGCATTCGA CGCCGACACT GCTTTCGGCC TCGGCGCCGA ACAGAAGATC
GCGGTCGCCG ACATCATGGC GGTGCGCGAG ATGGCGCCGC ATCTCGTCGA CGGTTATCAG
AGCGGATTGC CGCGGGTGTT CGTGCAGGTC CAGAACGGCT GCGATCACCG TTGCACGTTC
TGCATCATCC CGTTCGGCCG CGGCAATTCG CGTTCGGTGC CGATCGGCGC GGTGGTCGAT
CAGGTCCGCG CGTTGACCGA GCGTGGCCAT GCCGAGATCG TGCTGACCGG CGTCGATCTC
ACCAGCTACG GCGCCGACCT GCCCGGAACG CCGAAGCTCG GCGCGTTAGT CAAGAAAGTG
TTGCGCCACG TCCCGGAGCT GCAGCGGCTG CGGATTTCCT CGATCGATTC GATCGAGGCC
GATCGCGATC TGCTCGACGC GCTCGCCGGC GAACAACGGC TGATGCCGCA TCTGCATCTG
TCGCTGCAGG CCGGCGACGA TCTGATCCTG AAGCGGATGA AGCGGCGGCA TTTGCGCGAC
GACGCGATCG CGTTCTGCGA GGAGGTGCGG CGGCTGCGCC CGGACATTGC ACTCGGCGCC
GATCTGATCG CCGGTTTTCC GACCGAAACC GAGGCGATGT TTCGGCGCTC GCTCGATCTG
GTCGACGACT GCGGGCTGAC TTTCCTACAC GTGTTTCCGT ATTCGAAACG CCCCGGCACG
CCGGCGGCGC GGATGCCGCA GCTCGATGGC CGCATCATCC GCGAACGCGC CGCGCGGCTG
CGCGCCGCAG GCGAAGCGGC TTTGCAACGG CGCCTGCAGG CGGAAATCGG GCAAACTCGC
GCCGTGCTGA TCGAAAGCGC GACCCAAGGG CGCACGGAGC ATTTCATTCC GGTGGCGATG
TCAGGCGCGA CCCCGGGGAC GGTGCAGAGC CTGACGATCG CCGGGCACGA CGGCGCGCGG
CTGACGACTA CGCGCCGCTC CAGCCACACG CCGCAAGCCG CGGGTGCAGA TGCGGCGGCG
GCGGCGCGGT GA
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| Protein sequence | MAVEIVTFGC RLNAFESEVI RREAEGAGLH DAIVINSCAV TNEAVAQARQ QIRKLKRERP
GARIVVTGCA AQTEPATFAG MDEVDRVIGN DDKMRSEAWR AARIAFDADT AFGLGAEQKI
AVADIMAVRE MAPHLVDGYQ SGLPRVFVQV QNGCDHRCTF CIIPFGRGNS RSVPIGAVVD
QVRALTERGH AEIVLTGVDL TSYGADLPGT PKLGALVKKV LRHVPELQRL RISSIDSIEA
DRDLLDALAG EQRLMPHLHL SLQAGDDLIL KRMKRRHLRD DAIAFCEEVR RLRPDIALGA
DLIAGFPTET EAMFRRSLDL VDDCGLTFLH VFPYSKRPGT PAARMPQLDG RIIRERAARL
RAAGEAALQR RLQAEIGQTR AVLIESATQG RTEHFIPVAM SGATPGTVQS LTIAGHDGAR
LTTTRRSSHT PQAAGADAAA AAR
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