Gene RPD_0512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0512 
Symbol 
ID4020980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp584490 
End bp585215 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content69% 
IMG OID637960699 
Producthypothetical protein 
Protein accessionYP_567651 
Protein GI91974992 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.889697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGC AGCTCCACAC CCTCACCGCC GCCGCCCTGA TCCTCGCCAC GCTCGGCGCT 
GCGCCGGGTC GCGCTCAACC CGTGCCGTCG CCCCAGCAAT GGCAGCAGCA GTCGGCGATC
ACTGTCATCG GCGAAGCGCA GAAGTCGGTA CCGCCGGACA TCGCGCAGGT CGAAGCCGGC
GTTTCCAACA TGGCGAAGAC GGCGCGCGCC GCCGCCGAGG CCAACAACAA TGCGATGGGC
AAGGTGCTGC TCGAGCTGAG AAACGCCGGG ATCGACGCCA AGGACATCCA GACTTCGCGC
CTGTCGATTC AGCCGCAATA CGCATCAAAC CGGTCGGGGC CGAGCGAGAT CACGGGCTAT
CTCGCCAGCA ACCTCGTGAC CGTCCATGCG CGCGACATTG CCCGCGTCGC CGGCCTGGTC
GACACGCTGG TCGTCGCCGG CGCCAATGAG ATCCGCGGCA TCAGCTTCCG CGTCGCCAAT
TCGTCCAAGG TGCTCGACGA CGTCCGCACC GAGGCGATCG CCGACGCCCG GCGCAAGGCC
GAGATCTACG CGCGCGCCGC CGGCGTCACG CTCGGCGCGC CGCTGGTGAT TTCCGAGGAC
GCCAGCCCGG GCGTCGCGCC GATGCGCAAG ATGGCGACGA GTTTCGATGC CGGGGCGCCG
GTCGCCGCGG GCCAGGAAAC GCTGAGCGTC ACCGTGATGG TGAGCTGGGC GATCAAGGCC
CCGTAG
 
Protein sequence
MTMQLHTLTA AALILATLGA APGRAQPVPS PQQWQQQSAI TVIGEAQKSV PPDIAQVEAG 
VSNMAKTARA AAEANNNAMG KVLLELRNAG IDAKDIQTSR LSIQPQYASN RSGPSEITGY
LASNLVTVHA RDIARVAGLV DTLVVAGANE IRGISFRVAN SSKVLDDVRT EAIADARRKA
EIYARAAGVT LGAPLVISED ASPGVAPMRK MATSFDAGAP VAAGQETLSV TVMVSWAIKA
P