| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0507 |
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| Symbol | trmD |
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| ID | 4020975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 579543 |
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| End bp | 580361 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637960694 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_567646 |
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| Protein GI | 91974987 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGATG CGCGGGTCAA GCCCGCGCAT GACGCTTCGT TTGCAGCGAG CCTGCGCAAC
TCACGGACTG CTTCGATGTG GCGCGCTACT GTCCTCACCC TGTTTCCGGA GATGTTTCCC
GGACCGCTCG GCGTCAGCCT GGCGGGGCGG GCGCTGGCGG GCGGGCTGTG GGGGCTCGAG
GCGCGGGATA TCCGCGACTC GGCCACTGAC CGGCACCGCA GCGTCGACGA TACCCCGGCC
GGCGGCGGCC CCGGCATGGT GCTGCGCGCC GACGTGCTGG CCGCCGCGAT CGACGCCGCC
ACTCCCACGC CGGACCAGCC CCGGCTGGTG ATGAGCCCGC GCGGTCGGCC ATTGACCCAG
GCGCGCGTCG CGGACCTGGC CCGCGGCCCC GGCTCGCTGA TCGTCTGCGG CCGGTTCGAG
GGCATCGACC AGCGGGTGAT CGACGCGCGC GGCCTCGAAG AGGTGTCGAT CGGCGACTAC
GTGCTGTCGG GCGGCGAAAT CGCCGCGATG GCGCTGATCG ATGCCTGCGT CCGGCTGCTG
CCCGGCGTGA TGGGCAAGCT CGATTCCTCG ACCGAAGAGA GCTTTTCGGC CGGACTCCTG
GAATATCCGC AATACACCAG ACCGCAACTC TTCGAGGGCC GGGCGATCCC CGAGATCCTG
ACCAGCGGCG ATCACGGCAA GGTTGCGGCC TGGCGCCAGG CCGAGGCCGA GGCCCTGACG
CGGGCGCGCC GACCCGATCT TTGGGCCGCG ACAACCGCAA AAAAGGCCCC GGCGAAGGGT
GAATCACGAA AAACGCCAAA AAACACGACG GACGGGTGA
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| Protein sequence | MMDARVKPAH DASFAASLRN SRTASMWRAT VLTLFPEMFP GPLGVSLAGR ALAGGLWGLE
ARDIRDSATD RHRSVDDTPA GGGPGMVLRA DVLAAAIDAA TPTPDQPRLV MSPRGRPLTQ
ARVADLARGP GSLIVCGRFE GIDQRVIDAR GLEEVSIGDY VLSGGEIAAM ALIDACVRLL
PGVMGKLDSS TEESFSAGLL EYPQYTRPQL FEGRAIPEIL TSGDHGKVAA WRQAEAEALT
RARRPDLWAA TTAKKAPAKG ESRKTPKNTT DG
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